RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SERPINE1P05121 402 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SLC35E2BP0CK96 405 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PAMP19021 973 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CSKP41240 450 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MRPS22P82650 360 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ART3Q13508 389 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 TSNQ15631 228 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SPANXN3Q5MJ09 141 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 FRMD7Q6ZUT3 714 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 FAM126BQ8IXS8 530 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PTGR2Q8N8N7 351 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 NT5C3BQ969T7 300 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PPWD1Q96BP3 646 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PYCR2Q96C36 320 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 POLR1EQ9GZS1 481 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 LINC00597Q9H2U6 94 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MID1IP1Q9NPA3 183 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 IGSF9Q9P2J2 1179 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SLCO3A1Q9UIG8 710 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 Q9Y3F1 56 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SCN5AQ14524 2016 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MYOCOSA0A1B0GUC4 107 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 NPEPPSL1A6NEC2 478 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CDC7O00311 574 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CCDC22O60826 627 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 BAIAP3O94812 1187 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ALADP13716 330 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ARNTP27540 789 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CRHR1P34998 444 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CCDC15Q0P6D6 951 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 BOP1Q14137 746 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CAPRIN1Q14444 709 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SEMA3AQ14563 771 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 RBBP7Q16576 425 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 AGKQ53H12 422 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MBLAC2Q68D91 279 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PAQR3Q6TCH7 311 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MAVSQ7Z434 540 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 DDX53Q86TM3 631 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CCDC117Q8IWD4 279 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 BBS7Q8IWZ6 715 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CPNE9Q8IYJ1 553 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 RAB3IPQ96QF0 476 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 GPR21Q99679 349 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ILKAPQ9H0C8 392 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SLC24A3Q9HC58 644 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PRKAG3Q9UGI9 489 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 AGO1Q9UL18 857 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 TCAF1Q9Y4C2 921 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 C1orf232A0A0U1RR37 186 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 A0A1B0GTL3 188 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CCDC160A6NGH7 325 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 HIDE1A8MVS5 230 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 GSC2O15499 205 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 C1QAP02745 245 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 LRG1P02750 347 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 UGT2B4P06133 528 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SLC2A3P11169 496 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 IDH3AP50213 366 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 RAB10P61026 200 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ZXDBP98169 803 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 SLC18A2Q05940 514 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 HSPA14Q0VDF9 509 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PPP1R8Q12972 351 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PM20D1Q6GTS8 502 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 LRRC8EQ6NSJ5 796 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PSAPL1Q6NUJ1 521 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MRPL10Q7Z7H8 261 aaKnown RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PIANPQ8IYJ0 282 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ZNF276Q8N554 614 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 GBP7Q8N8V2 638 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PIP4K2CQ8TBX8 421 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 GRAMD1AQ96CP6 724 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 TUBGCP3Q96CW5 907 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CDRT15Q96T59 188 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 BOCQ9BWV1 1114 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 PIDD1Q9HB75 910 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ZNF334Q9HCZ1 680 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CD274Q9NZQ7 290 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 EGFL7Q9UHF1 273 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 DCDC2Q9UHG0 476 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 ACTL7BQ9Y614 415 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 INPP4BO15327 924 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ACSL4O60488 711 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PTPN4P29074 926 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PRDX3P30048 256 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SEMA3BQ13214 749 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PCBP1Q15365 356 aaKnown RBP eCLIP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 LSM12Q3MHD2 195 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 GRTP1Q5TC63 336 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 C6orf163Q5TEZ5 329 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 HECTD2Q5U5R9 776 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SEL1L3Q68CR1 1132 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 RNF43Q68DV7 783 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ANKS3Q6ZW76 656 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TSPAN33Q86UF1 283 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CENPLQ8N0S6 344 aaPredicted RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CDYL2Q8N8U2 506 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 NTAN1Q96AB6 310 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms