RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 LVRNQ6Q4G3 990 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 CRTC1Q6UUV9 634 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 DNAAF5Q86Y56 855 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 FSTL5Q8N475 847 aaPredicted RBP10.4□□□□□ -0.74
VPS50-201ENST00000251739 KYQ8NBH2 561 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 CXorf40AQ8TE69 158 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 TTC9Q92623 222 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 ECHDC3Q96DC8 303 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 LIN37Q96GY3 246 aaPredicted RBP10.4□□□□□ -0.74
VPS50-201ENST00000251739 EXOC2Q96KP1 924 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 MRGPRX2Q96LB1 330 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 MCEEQ96PE7 176 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 CCDC3Q9BQI4 270 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 WRAP53Q9BUR4 548 aaKnown RBP10.4□□□□□ -0.74
VPS50-201ENST00000251739 SELENOOQ9BVL4 669 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 SLC13A1Q9BZW2 595 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 CPNE5Q9HCH3 593 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 PRM3Q9NNZ6 103 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 PCDH12Q9NPG4 1184 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 PADI4Q9UM07 663 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 D6RAR5 112 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 CREB3O43889 395 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 ANXA6P08133 673 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 PLA2G2AP14555 144 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 VARSP26640 1264 aaKnown RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 RGRP47804 291 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 CSNK1DP48730 415 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 PPARDQ03181 441 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 GRM3Q14832 879 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 NFATC4Q14934 902 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 LRRC14Q15048 493 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 AFMIDQ63HM1 303 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 BRAT1Q6PJG6 821 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 CYP4V2Q6ZWL3 525 aaPredicted RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 ARHGAP12Q8IWW6 846 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 MCOLN2Q8IZK6 566 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 SDR16C5Q8N3Y7 309 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 ARFGAP1Q8N6T3 406 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 ARL10Q8N8L6 244 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 NEK11Q8NG66 645 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 WDR36Q8NI36 951 aaKnown RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 GLMNQ92990 594 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 NAF1Q96HR8 494 aaKnown RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 ZNF641Q96N77 438 aaPredicted RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 TUBGCP5Q96RT8 1024 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 AGPAT1Q99943 283 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 SUV39H2Q9H5I1 410 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 CATSPERBQ9H7T0 1116 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 UBA2Q9UBT2 640 aaPredicted RBP10.39□□□□□ -0.75
VPS50-201ENST00000251739 ATP8A1Q9Y2Q0 1164 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 COQ6Q9Y2Z9 468 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 DGKBQ9Y6T7 804 aa10.39□□□□□ -0.75
VPS50-201ENST00000251739 CCDC187A0A096LP49 1063 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 A0A1W2PQM1 296 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 CFAP69A5D8W1 941 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 TMEM110-MUSTN1A8MSY1 372 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 EIF3CLB5ME19 914 aaKnown RBP10.38□□□□□ -0.75
VPS50-201ENST00000251739 J3KR12 359 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 KLK10O43240 276 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 SIAH2O43255 324 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 RASGRP1O95267 797 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 ITGA2BP08514 1039 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 GM2AP17900 193 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 LIG3P49916 1009 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 BLKP51451 505 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 NDST2P52849 883 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 KIAA1024LP59773 190 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 MYL5Q02045 173 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 CFHR1Q03591 330 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 VAC14Q08AM6 782 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 RALGDSQ12967 914 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 MTM1Q13496 603 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 SPIDRQ14159 915 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 NCAPHQ15003 741 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 ELOCQ15369 112 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 CA9Q16790 459 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 FAXCQ5TGI0 409 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 BROXQ5VW32 411 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 PLEKHA7Q6IQ23 1121 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 SCYL2Q6P3W7 929 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 IRF2BP2Q7Z5L9 587 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 B3GNT8Q7Z7M8 397 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 CAMK1DQ8IU85 385 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 HID1Q8IV36 788 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 PDXPQ96GD0 296 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 NSMCE3Q96MG7 304 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 PEBP4Q96S96 227 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 RBM15Q96T37 977 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS50-201ENST00000251739 EIF3CQ99613 913 aaKnown RBP10.38□□□□□ -0.75
VPS50-201ENST00000251739 APOOQ9BUR5 198 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 EDEM3Q9BZQ6 932 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 ACSL6Q9UKU0 697 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 AP4E1Q9UPM8 1137 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 SDK2Q58EX2 2172 aa10.38□□□□□ -0.75
VPS50-201ENST00000251739 ANKRD62A6NC57 917 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 K7ENP7 123 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms