RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RNASEH1O60930 286 aaKnown RBP13□□□□□ -0.33
LSM8-201ENST00000249299 SIN3BO75182 1162 aa13□□□□□ -0.33
LSM8-201ENST00000249299 LEFTY1O75610 366 aa13□□□□□ -0.33
LSM8-201ENST00000249299 GJB3O75712 270 aa13□□□□□ -0.33
LSM8-201ENST00000249299 PDHA1P08559 390 aa13□□□□□ -0.33
LSM8-201ENST00000249299 ITGB7P26010 798 aa13□□□□□ -0.33
LSM8-201ENST00000249299 CHRNA4P43681 627 aa13□□□□□ -0.33
LSM8-201ENST00000249299 NUMBP49757 651 aa13□□□□□ -0.33
LSM8-201ENST00000249299 PTPN5P54829 565 aa13□□□□□ -0.33
LSM8-201ENST00000249299 STARD6P59095 220 aa13□□□□□ -0.33
LSM8-201ENST00000249299 GPX6P59796 221 aa13□□□□□ -0.33
LSM8-201ENST00000249299 ZBTB16Q05516 673 aa13□□□□□ -0.33
LSM8-201ENST00000249299 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
LSM8-201ENST00000249299 STARD3Q14849 445 aa13□□□□□ -0.33
LSM8-201ENST00000249299 PON2Q15165 354 aa13□□□□□ -0.33
LSM8-201ENST00000249299 KLHL38Q2WGJ6 581 aa13□□□□□ -0.33
LSM8-201ENST00000249299 ANKRD20A4Q4UJ75 823 aa13□□□□□ -0.33
LSM8-201ENST00000249299 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
LSM8-201ENST00000249299 ZDHHC20Q5W0Z9 365 aa13□□□□□ -0.33
LSM8-201ENST00000249299 NAIF1Q69YI7 327 aaPredicted RBP13□□□□□ -0.33
LSM8-201ENST00000249299 UNC5AQ6ZN44 842 aa13□□□□□ -0.33
LSM8-201ENST00000249299 RNF135Q8IUD6 432 aa13□□□□□ -0.33
LSM8-201ENST00000249299 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
LSM8-201ENST00000249299 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
LSM8-201ENST00000249299 CHST14Q8NCH0 376 aa13□□□□□ -0.33
LSM8-201ENST00000249299 LPCAT1Q8NF37 534 aa13□□□□□ -0.33
LSM8-201ENST00000249299 EZH1Q92800 747 aaPredicted RBP13□□□□□ -0.33
LSM8-201ENST00000249299 RAB7BQ96AH8 199 aa13□□□□□ -0.33
LSM8-201ENST00000249299 FAM129BQ96TA1 746 aa13□□□□□ -0.33
LSM8-201ENST00000249299 CYTH2Q99418 400 aa13□□□□□ -0.33
LSM8-201ENST00000249299 HDAC8Q9BY41 377 aa13□□□□□ -0.33
LSM8-201ENST00000249299 ACSS3Q9H6R3 686 aa13□□□□□ -0.33
LSM8-201ENST00000249299 ZDHHC6Q9H6R6 413 aa13□□□□□ -0.33
LSM8-201ENST00000249299 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
LSM8-201ENST00000249299 PRSS16Q9NQE7 514 aa13□□□□□ -0.33
LSM8-201ENST00000249299 TREX1Q9NSU2 369 aa13□□□□□ -0.33
LSM8-201ENST00000249299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13□□□□□ -0.339e-6■□□□□ 10.7
LSM8-201ENST00000249299 SCML1Q9UN30 329 aa13□□□□□ -0.33
LSM8-201ENST00000249299 NFS1Q9Y697 457 aa13□□□□□ -0.33
LSM8-201ENST00000249299 RPS6KL1Q9Y6S9 549 aa13□□□□□ -0.33
LSM8-201ENST00000249299 COL4A2P08572 1712 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 F5P12259 2224 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 ZCWPW2A0A1B0GU75 182 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 TCRBV9S1A1TA0A576 114 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 CAPN8A6NHC0 703 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 SHISA7A6NL88 538 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 H7C0S8 307 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 LDB2O43679 373 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
LSM8-201ENST00000249299 ACSL3O95573 720 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 ADH1BP00325 375 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 UGT2B4P06133 528 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 EPHX1P07099 455 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 BMP1P13497 986 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 ZNF30P17039 623 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 HMGCLP35914 325 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 HADHAP40939 763 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 OLIG2Q13516 323 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 LRRC32Q14392 662 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 POU6F1Q14863 301 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 CRYMQ14894 314 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 UGP2Q16851 508 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 EOGTQ5NDL2 527 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 TSTD2Q5T7W7 516 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 KIAA0930Q6ICG6 404 aaPredicted RBP12.99□□□□□ -0.33
LSM8-201ENST00000249299 TPRG1Q6ZUI0 275 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 TDRPQ86YL5 185 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 ANKMY2Q8IV38 441 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 MPP5Q8N3R9 675 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 RIBC1Q8N443 379 aaPredicted RBP12.99□□□□□ -0.33
LSM8-201ENST00000249299 IL17RCQ8NAC3 791 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
LSM8-201ENST00000249299 DTX3LQ8TDB6 740 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 PDCD6IPQ8WUM4 868 aaKnown RBP12.99□□□□□ -0.33
LSM8-201ENST00000249299 CDKL2Q92772 493 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 ASB2Q96Q27 587 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 OSBPL6Q9BZF3 934 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 CDH19Q9H159 772 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
LSM8-201ENST00000249299 ARHGEF3Q9NR81 526 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 CHRAC1Q9NRG0 131 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 ZNF446Q9NWS9 450 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 NSMCE4AQ9NXX6 385 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 SLC24A2Q9UI40 661 aa12.99□□□□□ -0.33
LSM8-201ENST00000249299 RGSL1A5PLK6 1076 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 FAM159BA6NKW6 160 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 CHURC1-FNTBB4DL54 471 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 H0Y858 1186 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 SLC7A4O43246 635 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 BNIP3LO60238 219 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 PIGNO95427 931 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 EGFP01133 1207 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 CYP2A6P11509 494 aaPredicted RBP12.98□□□□□ -0.33
LSM8-201ENST00000249299 TPH1P17752 444 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 LPOP22079 712 aaPredicted RBP12.98□□□□□ -0.33
LSM8-201ENST00000249299 SSTR1P30872 391 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 MGAT5Q09328 741 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 IFFO1Q0D2I5 559 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 GPS2Q13227 327 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms