RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 GRSF1Q12849 480 aaKnown RBP eCLIP7.37□□□□□ -1.235e-6■□□□□ 9.3
SSR1-201ENST00000244763 NAA30Q147X3 362 aaPredicted RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 RFX4Q33E94 735 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 SLC41A1Q8IVJ1 513 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 RASSF5Q8WWW0 418 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 AP3S1Q92572 193 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 OXNAD1Q96HP4 312 aaPredicted RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 SHDQ96IW2 340 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 NUAK2Q9H093 628 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 CRNNQ9UBG3 495 aaPredicted RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 RAP2CQ9Y3L5 183 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 TMEM131LA2VDJ0 1609 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 MCIDASD6RGH6 385 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 TAF4O00268 1085 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 RPIAP49247 311 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 POU5F1Q01860 360 aaKnown RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 PPP3CAQ08209 521 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 DDR1Q08345 913 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 XKR4Q5GH76 650 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 GET4Q7L5D6 327 aaPredicted RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 FAM35AQ86V20 835 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 C8orf59Q8N0T1 100 aaPredicted RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 ALLCQ8N6M5 410 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 SMG7Q92540 1137 aaKnown RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 EBNA1BP2Q99848 306 aaKnown RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 RNPEPQ9H4A4 650 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 LRRC19Q9H756 370 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 TFR2Q9UP52 801 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 VSTM5A8MXK1 200 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 RPL4P36578 427 aaKnown RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 ABL2P42684 1182 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 RHBDL3P58872 404 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 OASLQ15646 514 aaKnown RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 KLHL24Q6TFL4 600 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 FAM43BQ6ZT52 329 aaPredicted RBP7.37□□□□□ -1.23
SSR1-201ENST00000244763 MCEMP1Q8IX19 187 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 MAB21L3Q8N8X9 362 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 ALG9Q9H6U8 611 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 SMURF2Q9HAU4 748 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 SH3GLB1Q9Y371 365 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 IRAK3Q9Y616 596 aa7.37□□□□□ -1.23
SSR1-201ENST00000244763 CNTNAP1P78357 1384 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 A0A087X0B3 334 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 DCXO43602 365 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 FAAP100Q0VG06 881 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 PLEKHA7Q6IQ23 1121 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 LIN54Q6MZP7 749 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 DENND1AQ8TEH3 1009 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 TRIM63Q969Q1 353 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ROGDIQ9GZN7 287 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ERGIC3Q9Y282 383 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 LRRC10BA6NIK2 292 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 SNAP91O60641 907 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ASLP04424 464 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 PLK1P53350 603 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 GAD2Q05329 585 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ZNF57Q68EA5 555 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 BRSK1Q8TDC3 778 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 WFIKKN2Q8TEU8 576 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 BTBD9Q96Q07 612 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ACBD6Q9BR61 282 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 LACRTQ9GZZ8 138 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 BLOC1S4Q9NUP1 217 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSR1-201ENST00000244763 RBM7Q9Y580 266 aaKnown RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 BUD31P41223 144 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 C15orf59Q2T9L4 293 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 RTL4Q6ZR62 310 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 PTGR2Q8N8N7 351 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 ENKURQ8TC29 256 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 EEF1AKMT1Q8WVE0 214 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 CLCC1Q96S66 551 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 CDRT15Q96T59 188 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 HOPXQ9BPY8 73 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 SPATA2Q9UM82 520 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ROBO3Q96MS0 1386 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 PRMT5O14744 637 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 C1RP00736 705 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 MYL9P24844 172 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 DDX6P26196 483 aaKnown RBP eCLIP7.36□□□□□ -1.236e-8■□□□□ 9.2
SSR1-201ENST00000244763 HNRNPH1P31943 449 aaKnown RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 MC4RP32245 332 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 FBXO42Q6P3S6 717 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 PSRC1Q6PGN9 363 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 PARGQ86W56 976 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ZNF563Q8TA94 476 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 MFSD14AQ96MC6 490 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 KIFC1Q9BW19 673 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 BCL2L14Q9BZR8 327 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 SLC27A5Q9Y2P5 690 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 NEDD8-MDP1E9PL57 170 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 FARP2O94887 1054 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 ARF4P18085 180 aaPredicted RBP7.36□□□□□ -1.23
SSR1-201ENST00000244763 ITPKBP27987 946 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 ICAM3P32942 547 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 PDX1P52945 283 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 OLR1P78380 273 aa7.36□□□□□ -1.23
SSR1-201ENST00000244763 SPIRE1Q08AE8 756 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms