RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TUBB6Q9BUF5 446 aa17.09■□□□□ 0.33
CDKN1A-201ENST00000244741 C20orf27Q9GZN8 174 aa17.09■□□□□ 0.33
CDKN1A-201ENST00000244741 MARK1Q9P0L2 795 aa17.09■□□□□ 0.33
CDKN1A-201ENST00000244741 OR51B4Q9Y5P0 310 aa17.09■□□□□ 0.33
CDKN1A-201ENST00000244741 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 ANTXRLA6NF34 631 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 MT-CO1P00395 513 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 OXCT1P55809 520 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 IRX4P78413 519 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 SLC10A7Q0GE19 358 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 CRYMQ14894 314 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 GEN1Q17RS7 908 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 FUT11Q495W5 492 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 IER5LQ5T953 404 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 PACS1Q6VY07 963 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 GIMAP7Q8NHV1 300 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 CHFRQ96EP1 664 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 ALG14Q96F25 216 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 BTBD10Q9BSF8 475 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 DENND2DQ9H6A0 471 aaPredicted RBP17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 SYBUQ9NX95 663 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 KIAA1522Q9P206 1035 aaPredicted RBP17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 PSAT1Q9Y617 370 aa17.08■□□□□ 0.33
CDKN1A-201ENST00000244741 ARNTLO00327 626 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 CCDC22O60826 627 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 GSRP00390 522 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 ALDOAP04075 364 aaKnown RBP17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 PGAM1P18669 254 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 PTPN3P26045 913 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 CNTFP26441 200 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 GJA4P35212 333 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 OLIG2Q13516 323 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 KRT72Q14CN4 511 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 TMEM215Q68D42 235 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 C16orf46Q6P387 395 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 CES3Q6UWW8 571 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 CPA6Q8N4T0 437 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 NMUR2Q9GZQ4 415 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 RNPEPL1Q9HAU8 725 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 KCNK4Q9NYG8 393 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 IL1RAPL1Q9NZN1 696 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 ARMCX1Q9P291 453 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 VPS51Q9UID3 782 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 RAD54BQ9Y620 910 aa17.08■□□□□ 0.32
CDKN1A-201ENST00000244741 CHD5Q8TDI0 1954 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 K7ERQ8 282 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 BIRC5O15392 142 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 HOXC11O43248 304 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 CACNG3O60359 315 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 SNNO75324 88 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 GJB3O75712 270 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 PEX11BO96011 259 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 KITP10721 976 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 CCNCP24863 283 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 DGKGP49619 791 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 STK19P49842 368 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 ARF5P84085 180 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 PLEKHG6Q3KR16 790 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 PITRM1Q5JRX3 1037 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 WASHC2DQ5SRD0 308 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 RINLQ6ZS11 566 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 ZCCHC23Q6ZST2 131 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 PID1Q7Z2X4 250 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 LMLNQ96KR4 655 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 FERMT1Q9BQL6 677 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 ACE2Q9BYF1 805 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 EMCNQ9ULC0 261 aa17.07■□□□□ 0.32
CDKN1A-201ENST00000244741 TPP1O14773 563 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 MATN3O15232 486 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 KDELR3O43731 214 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 PRAMEF11O60813 436 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 PABPC1P11940 636 aaKnown RBP17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 MAXP61244 160 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 CYB5D2Q8WUJ1 264 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 N4BP2L2Q92802 583 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 ZDHHC4Q9NPG8 344 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 KLHL8Q9P2G9 620 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 IGSF9Q9P2J2 1179 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 MARCOQ9UEW3 520 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 TICRRQ7Z2Z1 1910 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 GSC2O15499 205 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 ENTPD5O75356 428 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 CISD3P0C7P0 127 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 CALB2P22676 271 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 PDE1CQ14123 709 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 CCNJLQ8IV13 435 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 ETFBKMTQ8IXQ9 262 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 CNTD1Q8N815 330 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 KCNV2Q8TDN2 545 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 CDKL2Q92772 493 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 NXPE3Q969Y0 559 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 EXOC2Q96KP1 924 aa17.06■□□□□ 0.32
CDKN1A-201ENST00000244741 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms