RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CCDC162PA2VCL2 907 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 LACTBL1A8MY62 500 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 J3QRK9 145 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 AGRPO00253 132 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 COL6A2P12110 1019 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 SLC7A1P30825 629 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CDH15P55291 814 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ZNF484Q5JVG2 852 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 BICRALQ6AI39 1079 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CENPSQ8N2Z9 138 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ADAM32Q8TC27 787 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 FBXL8Q96CD0 374 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 LIN28AQ9H9Z2 209 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 TRPV5Q9NQA5 729 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ADGRE2Q9UHX3 823 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 PEX16Q9Y5Y5 336 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CPSF7Q8N684 471 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 OR2T12Q8NG77 320 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 PPP3R2Q96LZ3 170 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ADGRE3Q9BY15 652 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 A0A1W2PQ72 361 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ODC1P11926 461 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 GNAZP19086 355 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 STAT5AP42229 794 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CPT1AP50416 773 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 SDE2Q6IQ49 451 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 LRRC49Q8IUZ0 686 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CERS5Q8N5B7 392 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ACSS2Q9NR19 701 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 NOCTQ9UK39 431 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 FAM50BQ9Y247 325 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 STX11O75558 287 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 LRIG2O94898 1065 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CHRNB2P17787 502 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ENTPD1P49961 510 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 OXCT1P55809 520 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 VEPH1Q14D04 833 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 HERC3Q15034 1050 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 SCIMPQ6UWF3 145 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 OSBPL10Q9BXB5 764 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 CRISPLD1Q9H336 500 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 PCDH18Q9HCL0 1135 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 OPTCQ9UBM4 332 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 F5H5T6 163 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 RNASEH1O60930 286 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 PAICSP22234 425 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 IL2P60568 153 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ZNF177Q13360 481 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 C12orf43Q96C57 262 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ROPN1LQ96C74 230 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 MRPL48Q96GC5 212 aaKnown RBP13.85□□□□□ -0.19
HCFC2-201ENST00000229330 TOR4AQ9NXH8 423 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 ZNF224Q9NZL3 707 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 U3KQV3 271 aa13.85□□□□□ -0.19
HCFC2-201ENST00000229330 OR6B1O95007 311 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 ERCC2P18074 760 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 TM4SF1P30408 202 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 PTGS2P35354 604 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 INTS11Q5TA45 600 aaKnown RBP13.84□□□□□ -0.19
HCFC2-201ENST00000229330 ELMO1Q92556 727 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
HCFC2-201ENST00000229330 SPATC1LQ9H0A9 340 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 CATSPERZQ9NTU4 200 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 FBXO5Q9UKT4 447 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 TRIM64CA6NLI5 447 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 TBX1O43435 398 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 KLHL18O94889 574 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 GOT1P17174 413 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 THOP1P52888 689 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 LIPEQ05469 1076 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 SIM2Q14190 667 aaPredicted RBP13.84□□□□□ -0.19
HCFC2-201ENST00000229330 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 SYT12Q8IV01 421 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 NKAPQ8N5F7 415 aaKnown RBP13.84□□□□□ -0.19
HCFC2-201ENST00000229330 OR8H1Q8NGG4 311 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 STARD8Q92502 1023 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 DMRTB1Q96MA1 342 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 ZNF512Q96ME7 567 aaPredicted RBP13.84□□□□□ -0.19
HCFC2-201ENST00000229330 IGSF9Q9P2J2 1179 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 ARHGAP28Q9P2N2 729 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 CNOT6Q9ULM6 557 aaKnown RBP13.84□□□□□ -0.19
HCFC2-201ENST00000229330 SNX7Q9UNH6 387 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 FAM240BA0A1B0GVZ2 78 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 ACKR2O00590 384 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 AIREO43918 545 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 MT-ND1P03886 318 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 AOC1P19801 751 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 IGFBP5P24593 272 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 CDH13P55290 713 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 VPS26BQ4G0F5 336 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 FKBP1CQ5VVH2 108 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 IL23RQ5VWK5 629 aa13.84□□□□□ -0.19
HCFC2-201ENST00000229330 LRRC20Q8TCA0 184 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms