RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 RBM20Q5T481 1227 aaKnown RBP17.7■□□□□ 0.42
GCDH-201ENST00000222214 TXNDC8Q6A555 127 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 LILRA6Q6PI73 481 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 OTOP2Q7RTS6 562 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 DCAF4L2Q8NA75 395 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 OR4L1Q8NH43 312 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 DNAJC1Q96KC8 554 aaKnown RBP17.7■□□□□ 0.42
GCDH-201ENST00000222214 CYP2S1Q96SQ9 504 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 FEM1AQ9BSK4 669 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 POPDC3Q9HBV1 291 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 GPAMQ9HCL2 828 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 CATSPERZQ9NTU4 200 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 INTS10Q9NVR2 710 aaKnown RBP17.7■□□□□ 0.42
GCDH-201ENST00000222214 STK38LQ9Y2H1 464 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 PTPRSQ13332 1948 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 DENND4CQ5VZ89 1909 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 AURKAO14965 403 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 TMCC1O94876 653 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 ATP5F1P24539 256 aaPredicted RBP17.7■□□□□ 0.42
GCDH-201ENST00000222214 CA8P35219 290 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 GRIA4P48058 902 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 GLRBP48167 497 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 DNAJB13P59910 316 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 PRKAA1Q13131 559 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 ZNF460Q14592 562 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 ACAP2Q15057 778 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 AFTPHQ6ULP2 937 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 NAPRTQ6XQN6 538 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 HTR3DQ70Z44 454 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 METTL3Q86U44 580 aaKnown RBP17.7■□□□□ 0.42
GCDH-201ENST00000222214 SUGP1Q8IWZ8 645 aaKnown RBP17.7■□□□□ 0.42
GCDH-201ENST00000222214 UBXN10Q96LJ8 280 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 SLC22A12Q96S37 553 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 PNPOQ9NVS9 261 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.7■□□□□ 0.42
GCDH-201ENST00000222214 HACD3Q9P035 362 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 VPS28Q9UK41 221 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 OR51B4Q9Y5P0 310 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 ACTL7AQ9Y615 435 aa17.7■□□□□ 0.42
GCDH-201ENST00000222214 NPHS1O60500 1241 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 WFS1O76024 890 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 ARRB2P32121 409 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 SLC8A1P32418 973 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 ZNF140P52738 457 aaPredicted RBP17.69■□□□□ 0.42
GCDH-201ENST00000222214 TYSND1Q2T9J0 566 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 ZNF789Q5FWF6 425 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 METTL21CQ5VZV1 264 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 RTL10Q7L3V2 364 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 PIWIL4Q7Z3Z4 852 aaKnown RBP17.69■□□□□ 0.42
GCDH-201ENST00000222214 GLT6D1Q7Z4J2 308 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 TTC7BQ86TV6 843 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 TMC8Q8IU68 726 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 HEXDCQ8WVB3 486 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 CDKN2AIPNLQ96HQ2 116 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 TCF12Q99081 682 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 NDNQ99608 321 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 OLFM1Q99784 485 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 EBF4Q9BQW3 602 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 C2orf49Q9BVC5 232 aaPredicted RBP17.69■□□□□ 0.42
GCDH-201ENST00000222214 CCDC106Q9BWC9 280 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 EMILIN2Q9BXX0 1053 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 IGSF5Q9NSI5 407 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 NCKIPSDQ9NZQ3 722 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 VPS9D1Q9Y2B5 631 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.69■□□□□ 0.42
GCDH-201ENST00000222214 SH3BP1Q9Y3L3 701 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 KCTD3Q9Y597 815 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 RAI2Q9Y5P3 530 aa17.69■□□□□ 0.42
GCDH-201ENST00000222214 TRAV19A0A0A6YYK7 116 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 CXorf51AA0A1B0GTR3 108 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 CCDC162PA2VCL2 907 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 ZBBXA8MT70 800 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 ZNF195O14628 629 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 PFDN6O15212 129 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 CXCL14O95715 111 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 PRLP01236 227 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 CKMP06732 381 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 AOC1P19801 751 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 IDH3AP50213 366 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 DLG1Q12959 904 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 PPIGQ13427 754 aaKnown RBP eCLIP17.68■□□□□ 0.425e-7■■■□□ 16.2
GCDH-201ENST00000222214 TUBB3Q13509 450 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 RETSATQ6NUM9 610 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 NCEH1Q6PIU2 408 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 GAREM2Q75VX8 874 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 TDRD5Q8NAT2 981 aaKnown RBP17.68■□□□□ 0.42
GCDH-201ENST00000222214 ACDQ96AP0 544 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 LRRC3Q9BY71 257 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 MARCH4Q9P2E8 410 aaPredicted RBP17.68■□□□□ 0.42
GCDH-201ENST00000222214 VTI1BQ9UEU0 232 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 BAIAP2L1Q9UHR4 511 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 TAGLN3Q9UI15 199 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 LZTS1Q9Y250 596 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 IRAK3Q9Y616 596 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
GCDH-201ENST00000222214 ANKRD66B4E2M5 251 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 CHUKO15111 745 aa17.68■□□□□ 0.42
GCDH-201ENST00000222214 GYG2O15488 501 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms