RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 SLCO4A1Q96BD0 722 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 IMP4Q96G21 291 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 PARK7Q99497 189 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 ZCWPW1Q9H0M4 648 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 VPS45Q9NRW7 570 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 NDFIP2Q9NV92 336 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 DSEQ9UL01 958 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
SRP54-201ENST00000216774 BBIP1A8MTZ0 92 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 E9PAM4 449 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 STAMBPO95630 424 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 SCNN1GP51170 649 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 RENBPP51606 427 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 RALGDSQ12967 914 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 PCSK7Q16549 785 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 NRF1Q16656 503 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 KDELC2Q7Z4H8 507 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 TSPAN14Q8NG11 270 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 OR13J1Q8NGT2 312 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 SCAMP5Q8TAC9 235 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 EZH1Q92800 747 aaPredicted RBP13.36□□□□□ -0.27
SRP54-201ENST00000216774 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 RNF11Q9Y3C5 154 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
SRP54-201ENST00000216774 H6PDO95479 791 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 PEX11BO96011 259 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 ZNF23P17027 643 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 PLK1P53350 603 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 STX1BP61266 288 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 LRRC23Q53EV4 343 aaPredicted RBP13.36□□□□□ -0.27
SRP54-201ENST00000216774 ZNF678Q5SXM1 525 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 ISLR2Q6UXK2 745 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 CYHR1Q6ZMK1 362 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 ANKFN1Q8N957 763 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 ANKRD49Q8WVL7 239 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 LPPQ93052 612 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 PHF21BQ96EK2 531 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 C1orf74Q96LT6 269 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 AP5M1Q9H0R1 490 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
SRP54-201ENST00000216774 SEMA6AQ9H2E6 1030 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 TMLHEQ9NVH6 421 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 ARMC1Q9NVT9 282 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 Q9Y3F1 56 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 MTF2Q9Y483 593 aaPredicted RBP13.36□□□□□ -0.27
SRP54-201ENST00000216774 SNX13Q9Y5W8 968 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 SQORQ9Y6N5 450 aa13.36□□□□□ -0.27
SRP54-201ENST00000216774 NYNRINQ9P2P1 1898 aaKnown RBP13.35□□□□□ -0.27
SRP54-201ENST00000216774 MROH6A6NGR9 719 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 UBFD1O14562 309 aaKnown RBP13.35□□□□□ -0.27
SRP54-201ENST00000216774 TNPO2O14787 897 aaKnown RBP13.35□□□□□ -0.27
SRP54-201ENST00000216774 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
SRP54-201ENST00000216774 TRPA1O75762 1119 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 CSPG5O95196 566 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 BMP2P12643 396 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 PAX3P23760 479 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 AGMOQ6ZNB7 445 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 AMIGO2Q86SJ2 522 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 DRAXINQ8NBI3 349 aaPredicted RBP13.35□□□□□ -0.27
SRP54-201ENST00000216774 B4GALNT2Q8NHY0 566 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 CASP10Q92851 521 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 ANKRD60Q9BZ19 345 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 PNPLA3Q9NST1 481 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 SFMBT1Q9UHJ3 866 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 CNOT6Q9ULM6 557 aaKnown RBP13.35□□□□□ -0.27
SRP54-201ENST00000216774 TRPV2Q9Y5S1 764 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 HS3ST4Q9Y661 456 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 PATJQ8NI35 1801 aa13.35□□□□□ -0.27
SRP54-201ENST00000216774 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 ARSAP15289 507 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 HOXB8P17481 243 aaPredicted RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 CDH2P19022 906 aaPredicted RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 HDCP19113 662 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 NDST2P52849 883 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 MLLT6P55198 1093 aaPredicted RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 HERVK_113P63132 956 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 BEX3Q00994 111 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 MTX3Q5HYI7 312 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 NOMO2Q5JPE7 1267 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 MORN1Q5T089 497 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 RPS27LQ71UM5 84 aaKnown RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 UMODL1-AS1Q8N2C9 162 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 OR2T34Q8NGX1 318 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 OR2T3Q8NH03 318 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 ZUFSPQ96AP4 578 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 ERVK-6Q9BXR3 956 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 ALG9Q9H6U8 611 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 CEPT1Q9Y6K0 416 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms