RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OR56A4Q8NGH8 313 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 CNDP1Q96KN2 507 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 BTBD9Q96Q07 612 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 GPR174Q9BXC1 333 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 IL22Q9GZX6 179 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 PHGDHO43175 533 aaKnown RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 ERAL1O75616 437 aaKnown RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 GHRHRQ02643 423 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 ACSM2AQ08AH3 577 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 PTPN20Q4JDL3 420 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 ACSM2BQ68CK6 577 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 UBE2E3Q969T4 207 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 TTLL2Q9BWV7 592 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 CRABP2P29373 138 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 RCN1Q15293 331 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 PLEKHG6Q3KR16 790 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 CNPY4Q8N129 248 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 OR9Q1Q8NGQ5 310 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 SNRNP27Q8WVK2 155 aaKnown RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 GFM2Q969S9 779 aaKnown RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 DPY30Q9C005 99 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 MTMR11A4FU01 709 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 KRT16P08779 473 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 DPYSL3Q14195 570 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 HYIQ5T013 277 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 PTCRAQ6ISU1 281 aaPredicted RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 ALG9Q9H6U8 611 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 WDR26Q9H7D7 661 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 PPCSQ9HAB8 311 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 MRPS33Q9Y291 106 aaKnown RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 TEX28O15482 410 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 DSC2Q02487 901 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 GNA13Q14344 377 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 COMMD2Q86X83 199 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 FAM3CQ92520 227 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 HDAC10Q969S8 669 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 DPYSL5Q9BPU6 564 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 SGIP1Q9BQI5 828 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 E7ENQ6 273 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 ERN1O75460 977 aaKnown RBP13.79□□□□□ -0.2
SIX4-201ENST00000216513 FGF1P05230 155 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 SPAM1P38567 509 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 OR4L1Q8NH43 312 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 ANKRD7Q92527 254 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 NUS1Q96E22 293 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 HHIPL1Q96JK4 782 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 EDDM13A0A1B0GTR0 161 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 MPOP05164 745 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 MARCKSL1P49006 195 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 XYLT1Q86Y38 959 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 PARP8Q8N3A8 854 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 FNDC5Q8NAU1 212 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 TMEM120AQ9BXJ8 343 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 GPR62Q9BZJ7 368 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 ROGDIQ9GZN7 287 aa13.79□□□□□ -0.2
SIX4-201ENST00000216513 ZNF682O95780 498 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 IMPDH2P12268 514 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 VIPR2P41587 438 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 STX4Q12846 297 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 ZDHHC20Q5W0Z9 365 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 IL27RAQ6UWB1 636 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 PHF13Q86YI8 300 aaPredicted RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 MCEMP1Q8IX19 187 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 FAM9CQ8IZT9 166 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 SEPHS2Q99611 448 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 GTPBP1O00178 669 aaKnown RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 FFAR3O14843 346 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 GPR42O15529 346 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 CNMDO75829 334 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 SHBGP04278 402 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 HNRNPA1P09651 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
SIX4-201ENST00000216513 NEK3P51956 506 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 DAOAP59103 153 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 Q6ZVU0 165 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 SCAIQ8N9R8 606 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 SELENOMQ8WWX9 145 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 PHF21AQ96BD5 680 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 CPNE1Q99829 537 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 ZNF670Q9BS34 389 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 FAIM2Q9BWQ8 316 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 KLRC4O43908 158 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 WDR47O94967 919 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 EPCAMP16422 314 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 HPCAL1P37235 193 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 GP5P40197 560 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 KCNQ1P51787 676 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 VAC14Q08AM6 782 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms