RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.33
CHGA-201ENST00000216492 ZDHHC7Q9NXF8 308 aa17.08■□□□□ 0.33
CHGA-201ENST00000216492 ANAPC1Q9H1A4 1944 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 TYW5A2RUC4 315 aaKnown RBP17.08■□□□□ 0.32
CHGA-201ENST00000216492 H0Y626 953 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 MOSPD3O75425 235 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 DDX6P26196 483 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHGA-201ENST00000216492 ETFBP38117 255 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 IDH3AP50213 366 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 LBRQ14739 615 aaKnown RBP17.08■□□□□ 0.32
CHGA-201ENST00000216492 ARHGAP15Q53QZ3 475 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 CFAP157Q5JU67 520 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 GRASPQ7Z6J2 395 aaPredicted RBP17.08■□□□□ 0.32
CHGA-201ENST00000216492 LEMD2Q8NC56 503 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 TSNARE1Q96NA8 513 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 AGAP2Q99490 1192 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 SLC25A51Q9H1U9 297 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 TASP1Q9H6P5 420 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
CHGA-201ENST00000216492 CHD9Q3L8U1 2897 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 DOCK4Q8N1I0 1966 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 GFRA2O00451 464 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 SIN3BO75182 1162 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 TBX10O75333 385 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 HSPA4LO95757 839 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 COPAP53621 1224 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 GEMP55040 296 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 MAXP61244 160 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 NTHL1P78549 312 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 SLC5A9Q2M3M2 681 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 CERCAMQ5T4B2 595 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 C1orf146Q5VVC0 180 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 BBS7Q8IWZ6 715 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 FAM217AQ8IXS0 508 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 KIRREL3Q8IZU9 778 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 CARNMT1Q8N4J0 409 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 FBXO27Q8NI29 283 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 CMTM5Q96DZ9 223 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 MFSD3Q96ES6 412 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 PNPOQ9NVS9 261 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 MSRAQ9UJ68 235 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 ANKRD6Q9Y2G4 727 aa17.07■□□□□ 0.32
CHGA-201ENST00000216492 MAP3K7O43318 606 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 KDELR3O43731 214 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 HOXD9P28356 352 aaPredicted RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 ACTR3P61158 418 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 TNK2Q07912 1038 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 COL13A1Q5TAT6 717 aaPredicted RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 TMCO4Q5TGY1 634 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 RNF219Q5W0B1 726 aaPredicted RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 PPP2R2DQ66LE6 453 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 PDPK2PQ6A1A2 396 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 CXorf57Q6NSI4 855 aaKnown RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 ELMSAN1Q6PJG2 1045 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 RIPOR1Q6ZS17 1223 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 CLEC14AQ86T13 490 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 HJURPQ8NCD3 748 aaPredicted RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 IPMKQ8NFU5 416 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 SH3RF2Q8TEC5 729 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 DDI1Q8WTU0 396 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 BHMTQ93088 406 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 ZNF599Q96NL3 588 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 OSBPL1AQ9BXW6 950 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 MUC3BQ9H195 1237 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 PDFQ9HBH1 243 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 NMRAL1Q9HBL8 299 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 ATP13A1Q9HD20 1204 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 CCL26Q9Y258 94 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 PMPCBO75439 489 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 OXCT1P55809 520 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 AP2B1P63010 937 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 MRPS35P82673 323 aaKnown RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 LCA5Q86VQ0 697 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 OR6Y1Q8NGX8 325 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 DTX3LQ8TDB6 740 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 IMP4Q96G21 291 aaKnown RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 VPS39Q96JC1 886 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 FAM167BQ9BTA0 163 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 ACE2Q9BYF1 805 aaPredicted RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 SLC28A3Q9HAS3 691 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 GPAMQ9HCL2 828 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 CHRAC1Q9NRG0 131 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 IARS2Q9NSE4 1012 aaKnown RBP17.06■□□□□ 0.32
CHGA-201ENST00000216492 TDP1Q9NUW8 608 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 SLC7A8Q9UHI5 535 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 LRCH1Q9Y2L9 728 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 CEP290O15078 2479 aa17.06■□□□□ 0.32
CHGA-201ENST00000216492 E2F8A0AVK6 867 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 TRIM13O60858 407 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 TPH1P17752 444 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 MAVSQ7Z434 540 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 KDELC2Q7Z4H8 507 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 TNS4Q8IZW8 715 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 PLD6Q8N2A8 252 aaKnown RBP17.05■□□□□ 0.32
CHGA-201ENST00000216492 PGBD5Q8N414 524 aa17.05■□□□□ 0.32
CHGA-201ENST00000216492 CPXM2Q8N436 756 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms