RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 BRAFP15056 766 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 CES1P23141 567 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 MGAT1P26572 445 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 IRAK1P51617 712 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 SESN2P58004 480 aaPredicted RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 GNA12Q03113 381 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 USP4Q13107 963 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 LAMB3Q13751 1172 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 ZNF77Q15935 545 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 CTAGE3PQ8IX95 158 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 TEX26Q8N6G2 289 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 HJURPQ8NCD3 748 aaPredicted RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 MDGA1Q8NFP4 955 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 USP33Q8TEY7 942 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 SGSM3Q96HU1 749 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 TBL1YQ9BQ87 522 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 NUSAP1Q9BXS6 441 aaKnown RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 NOL6Q9H6R4 1146 aaKnown RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 NDFIP2Q9NV92 336 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 ZNF212Q9UDV6 495 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 TBK1Q9UHD2 729 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 SH3BP1Q9Y3L3 701 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 TTLL3Q9Y4R7 772 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 WNT6Q9Y6F9 365 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 ACACAQ13085 2346 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 FAM237BA0A1B0GVD1 139 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 SPAARA0A1B0GVQ0 90 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 FAM159BA6NKW6 160 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 PRAMEF11O60813 436 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 USP1O94782 785 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 ALDH1A2O94788 518 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 MAPK8P45983 427 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 SEC13P55735 322 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 DNAJC3Q13217 504 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 ZNF235Q14590 738 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 LBRQ14739 615 aaKnown RBP12.34□□□□□ -0.43
SNU13-201ENST00000215956 EML3Q32P44 896 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 ARHGAP36Q6ZRI8 547 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 SRRM1Q8IYB3 904 aaKnown RBP12.34□□□□□ -0.43
SNU13-201ENST00000215956 CNTD1Q8N815 330 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 ZNF557Q8N988 423 aaPredicted RBP12.34□□□□□ -0.43
SNU13-201ENST00000215956 OR52K1Q8NGK4 314 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 MLPHQ9BV36 600 aaPredicted RBP12.34□□□□□ -0.43
SNU13-201ENST00000215956 POLR1EQ9GZS1 481 aaKnown RBP12.34□□□□□ -0.43
SNU13-201ENST00000215956 TRABDQ9H4I3 376 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
SNU13-201ENST00000215956 KCNK9Q9NPC2 374 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 SEPT3Q9UH03 358 aa12.34□□□□□ -0.43
SNU13-201ENST00000215956 C2orf78A6NCI8 922 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 PRPF4O43172 522 aaKnown RBP eCLIP12.33□□□□□ -0.43
SNU13-201ENST00000215956 MT-ND3P03897 115 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 HLA-DQB2P05538 268 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 CKMP06732 381 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 SNRPAP09012 282 aaKnown RBP12.33□□□□□ -0.43
SNU13-201ENST00000215956 IRF1P10914 325 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 ENGP17813 658 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 PAMP19021 973 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 GCAP28676 217 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 SLC6A4P31645 630 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 LSP1P33241 339 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 SIM1P81133 766 aaPredicted RBP12.33□□□□□ -0.43
SNU13-201ENST00000215956 MGAT5Q09328 741 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 ILF2Q12905 390 aaKnown RBP12.33□□□□□ -0.43
SNU13-201ENST00000215956 C2orf27AQ580R0 203 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 PCID2Q5JVF3 399 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 MPP7Q5T2T1 576 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 MARK2Q7KZI7 788 aaKnown RBP12.33□□□□□ -0.43
SNU13-201ENST00000215956 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.43
SNU13-201ENST00000215956 LPCAT2Q7L5N7 544 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 CPXM2Q8N436 756 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 PPM1NQ8N819 430 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.43
SNU13-201ENST00000215956 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 RNF38Q9H0F5 515 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 MOCS1Q9NZB8 636 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 CTNNAL1Q9UBT7 734 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 MMP17Q9ULZ9 603 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 TBC1D30Q9Y2I9 924 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 CPQQ9Y646 472 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 FAM169AQ9Y6X4 670 aa12.33□□□□□ -0.43
SNU13-201ENST00000215956 TMEM120BA0PK00 339 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 FAM47DPA6NHR8 397 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 F5H423 210 aaPredicted RBP12.33□□□□□ -0.44
SNU13-201ENST00000215956 KDELR3O43731 214 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 FAM155BO75949 473 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 CHN1P15882 459 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 GRIA1P42261 906 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 ITKQ08881 620 aa12.33□□□□□ -0.44
SNU13-201ENST00000215956 CRYMQ14894 314 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms