RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 GTF2BQ00403 316 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 GPRIN3Q6ZVF9 776 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SPATA22Q8NHS9 363 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 BTN3A3O00478 584 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC28A2O43868 658 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 MAPKAPK2P49137 400 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 RHAGQ02094 409 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 CCDC185Q8N715 623 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 NXNL1Q96CM4 212 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 P2RY11Q96G91 374 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 CPXM1Q96SM3 734 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 EBPLQ9BY08 206 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 G3V2T6 193 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 DDX3YO15523 660 aaKnown RBP13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 MFSD11O43934 449 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SEPHS1P49903 392 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 GALK1P51570 392 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 TIGD2Q4W5G0 525 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 GHDCQ8N2G8 530 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 EPB41L4BQ9H329 900 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 CHRAC1Q9NRG0 131 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 HOXA2O43364 376 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 LIPMQ5VYY2 423 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 ATP6V1C2Q8NEY4 427 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 EBNA1BP2Q99848 306 aaKnown RBP13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 ABHD16BQ9H3Z7 469 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 CDH9Q9ULB4 789 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 COQ6Q9Y2Z9 468 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 OR10H2O60403 315 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 PAGE1O75459 146 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 TGFB3P10600 412 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 VPS26BQ4G0F5 336 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC25A24Q6NUK1 477 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 PACS1Q6VY07 963 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM129CQ86XR2 697 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SETD9Q8NE22 299 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 TSSK3Q96PN8 268 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 PANX3Q96QZ0 392 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 RIPK3Q9Y572 518 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 ADAMTS3O15072 1205 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 UGT1A9O60656 530 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 CDK7P50613 346 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SCRN3Q0VDG4 424 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 ANKRD46Q86W74 232 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SUSD6Q92537 303 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 MCMBPQ9BTE3 642 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 TOR3AQ9H497 397 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 UGT1A7Q9HAW7 530 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 UGT1A10Q9HAW8 530 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 UGT1A8Q9HAW9 530 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 KANSL3Q9P2N6 904 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 KPNA5O15131 536 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 POU2F1P14859 743 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 AMD1P17707 334 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 ABATP80404 500 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 KRR1Q13601 381 aaKnown RBP13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 GPR158Q5T848 1215 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 KLHL24Q6TFL4 600 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 PRRG3Q9BZD7 231 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 NMUR2Q9GZQ4 415 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 SNX6Q9UNH7 406 aa13.65□□□□□ -0.22
TGFBR3-201ENST00000212355 ISM1B1AKI9 464 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CCL16O15467 120 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 NTSP30990 170 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 NDUFV1P49821 464 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 DUSP4Q13115 394 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 PHF10Q8WUB8 498 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 NELL1Q92832 810 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 AARSD1Q9BTE6 412 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 PDCD10Q9BUL8 212 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CHID1Q9BWS9 393 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ADGRE2Q9UHX3 823 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 PSMD7P51665 324 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 MRPS6P82932 125 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CYP2A13Q16696 494 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 INO80DQ53TQ3 878 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM171BQ6P995 826 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 C12orf56Q8IXR9 622 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CLYBLQ8N0X4 340 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CLN6Q9NWW5 311 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ZNF536O15090 1300 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 A0A0J9YYE9 177 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ANXA6P08133 673 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CREB1P16220 341 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC5A9Q2M3M2 681 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 CXorf57Q6NSI4 855 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ABRAXAS1Q6UWZ7 409 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 KRT74Q7RTS7 529 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 OR4L1Q8NH43 312 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms