RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Sept10Q8C650 452 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ipo13Q8K0C1 963 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr1325Q8VF43 315 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pmf1Q9CPV5 202 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cib1Q9Z0F4 191 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Bnip3lQ9Z2F7 218 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gria3Q9Z2W9 888 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Hcn4O70507 1186 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Atxn1lP0C7T6 687 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ca8P28651 291 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Nploc4P60670 608 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Stx1bP61264 288 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 YwhaqP68254 245 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Brms1lQ3U1T3 323 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rnf145Q5SWK7 663 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dyrk2Q5U4C9 599 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Q5XFZ0 217 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Trim62Q80V85 475 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam83eQ80XS7 481 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 ThtpaQ8JZL3 224 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sbk1Q8QZX0 417 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ppa2Q91VM9 330 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Smim14Q91VT8 99 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fuca1Q99LJ1 452 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rpl34Q9D1R9 117 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cdkn2aipnlQ9D211 116 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam227aQ9D3V8 625 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 NvlQ9DBY8 855 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 B4galt4Q9JJ04 344 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Spag4Q9JJF2 443 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cdh17Q9R100 827 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mbtps1Q9WTZ2 1052 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zbtb12Q9Z150 459 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Bag6Q9Z1R2 1154 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 SrcapA0A087WQ44 3271 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gbp6A0A0G2JDV3 611 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Wfdc16A2A5H4 111 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn1r3A2AMT7 306 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn2r55G3UWZ4 781 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm3383J3QQ59 259 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn2r67K7N6T2 851 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm3164L7N2B9 238 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm3239L7N2D9 227 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn2r53L7N473 806 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Il4i1O09046 630 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ptpn20O55082 426 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Adcy1O88444 1118 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Il6raP22272 460 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Msr1P30204 458 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ptger1P35375 405 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gdf6P43028 454 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 AnpepP97449 966 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmem102Q3UPR7 509 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cep295nlQ497N6 533 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rab26Q504M8 260 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tex24Q5DP50 351 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Smpd4Q6ZPR5 823 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mppe1Q80XL7 396 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cxcr1Q810W6 351 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 LppQ8BFW7 613 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 DrgxQ8BYH0 263 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rab36Q8CAM5 267 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn1r205Q8R276 316 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn1r79Q8R285 306 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sec16bQ91XT4 1051 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rmnd5bQ91YQ7 393 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rsl24d1Q99L28 163 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pinx1Q9CZX5 332 aaKnown RBP12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rsph14Q9D3W1 341 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam83dQ9D7I8 585 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tspan3Q9QY33 253 aa12.97□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ttc3O88196 1979 aaKnown RBP12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f15A0A087WR44 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f12A0A0A0MQP3 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f9A2BFZ7 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f7A2BHG6 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f19A2CG71 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f10A2CG92 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f3A2CGC2 496 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Usp51B1AY15 661 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f13B8JKF6 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f2J3QMS5 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f25J3QMV9 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f6J3QMW9 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f26J3QNK2 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f24J3QNQ5 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f8J3QQ50 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyp2c68K7N6C2 491 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f17L7MU81 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f18L7MU83 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn2r46L7N282 809 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Apoa4P06728 395 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Impdh2P24547 514 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 SykP48025 629 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gucy2eP52785 1108 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 SirpaP97797 513 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mtf2Q02395 593 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ptchd3Q0EEE2 906 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f14Q1LZI5 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd35f27Q5FWA1 498 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms