RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Gria4Q9Z2W8 902 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 ShprhQ7TPQ3 1674 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fam43bA2AM80 330 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Siah3B2RWG3 268 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Nsmce4aG3XA30 381 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm6356L7N2A7 188 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Suv39h1O54864 412 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cyp2d9P11714 504 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Polr1dP97304 133 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Colec11Q3SXB8 272 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lars2Q8VDC0 902 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Eif3kQ9DBZ5 218 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 H2afb2S4R1M3 115 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm11983V9GXS8 105 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Herc6F2Z461 1003 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tmem184cQ3TPR7 525 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pcdhb8Q91XZ2 779 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gadd45gip1Q9CR59 222 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Q9D4A5 307 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tmem115Q9WUH1 350 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cdh3P10287 822 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ptpn11P35235 597 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Polr2lP62876 67 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Trappc9Q3U0M1 1148 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cyp2c66Q5GLZ0 490 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 HpseQ6YGZ1 535 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fnip2Q80TD3 1108 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Prpf19Q99KP6 504 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tbx20Q9ES03 445 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Olfr600E9PUN7 314 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm3893E9Q1I1 302 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rps6ka3P18654 740 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mcpt4P21812 246 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PtpaP58389 323 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lpar1P61793 364 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Slc39a4Q78IQ7 660 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Nup54Q8BTS4 510 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 ApmapQ9D7N9 415 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Btbd19S4R1I0 287 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 AcadmP45952 421 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Adra1dP97714 562 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Slc2a6Q3UDF0 497 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rmdn3Q3UJU9 470 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Shc3Q61120 474 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Parp6Q6P6P7 630 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cyp2d12Q8BVD2 504 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rbm4Q8C7Q4 361 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Acad9Q8JZN5 625 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Acvr1cQ8K348 493 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rbm4bQ8VE92 357 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tfap2dQ91ZK0 452 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cpxm2Q9D2L5 764 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tecpr2Q3UH45 1423 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ssxb3Q6XAS4 170 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Atg4cQ811C2 458 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tmsb15lQ8C0W0 80 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pabpc5Q8C7D3 381 aaKnown RBP14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 GldcQ91W43 1025 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 ToporslQ9D2F8 683 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Syvn1Q9DBY1 612 aa14□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm21319F6YNI8 144 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mid1O70583 680 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Nudt2P56380 147 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 S100a1P56565 94 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Entpd7Q3TCT4 606 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Slfn4Q3UV66 602 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ttc9Q3V038 219 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Smarcd1Q61466 515 aaKnown RBP13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Olfr589Q8VGV8 317 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 GneQ91WG8 722 aaKnown RBP13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Hm13Q9D8V0 378 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 RptorQ8K4Q0 1335 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ncam2O35136 837 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mdm4O35618 489 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 IdsQ08890 552 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 YdjcQ14BV6 310 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ints7Q7TQK1 966 aaKnown RBP13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 LnpepQ8C129 1025 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 TiparpQ8C1B2 657 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rassf3Q99P51 232 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lima1Q9ERG0 753 aaKnown RBP13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rab27aQ9ERI2 221 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ltb4r2Q9JJL9 360 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Hbb-bh2B2RVB7 147 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Vmn2r42O35192 852 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Epha2Q03145 977 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Q32P12 615 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PostnQ62009 838 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rbl1Q64701 1063 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Slc25a12Q8BH59 677 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mettl3Q8C3P7 580 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Trmt6Q8CE96 497 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Serpina11Q8CIE0 424 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Dgat1Q9Z2A7 498 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Crb1Q8VHS2 1405 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Hectd3Q3U487 861 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Smu1Q3UKJ7 513 aaKnown RBP13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ftsj1Q8CBC7 324 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pcdhb17Q91VD8 799 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ndufb5Q9CQH3 189 aa13.99□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms