RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ipcef1Q5DU31 406 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Abcd2Q61285 741 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Sema4bQ62179 823 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Tgfbr2Q62312 592 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 ProcrQ64695 242 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 BC061212Q6P8K3 481 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dpy19l3Q71B07 716 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Arhgef19Q8BWA8 802 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rbm4Q8C7Q4 361 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Alg3Q8K2A8 438 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Zbtb44Q8R0A2 453 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rbm4bQ8VE92 357 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Osbpl3Q9DBS9 855 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Il22Q9JJY9 179 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Iqgap1Q9JKF1 1657 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr1305A2AVW3 312 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm3642K7N6V4 267 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dhx15O35286 795 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Hes2O54792 157 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Srp54P14576 504 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Vbp1P61759 196 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pros1Q08761 675 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nxpe4Q52KP5 543 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nfe2l1Q61985 741 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Phf8Q80TJ7 1023 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Tecpr1Q80VP0 1166 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Kcng4Q80XM3 506 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Las2Q8CB14 526 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 B3gnt7Q8K0J2 397 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pacs1Q8K212 961 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gprc6aQ8K4Z6 928 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Klrb1fQ8VD98 217 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Retreg1dQ8VE91 480 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mfsd5Q921Y4 450 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 NamptQ99KQ4 491 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Riok2Q9CQS5 547 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Kcne2Q9D808 123 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Hmgn3Q9DCB1 99 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rdh14Q9ERI6 334 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Jph1Q9ET80 660 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 CcniQ9Z2V9 377 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Keap1Q9Z2X8 624 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 4933424G06RikA0A140LIP3 267 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 TagapB2RWW0 714 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pcdh10E9PXQ7 1057 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm8126E9Q1N7 198 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Vmn2r70K7N702 854 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dcpp3L7N259 170 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pknox1O70477 436 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 PitpnaP53810 271 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Neurl1bQ0MW30 546 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cldn11Q60771 207 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Slc20a1Q61609 681 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ugt1a1Q63886 535 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gpatch2lQ6PE65 482 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr792Q7TRH9 311 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Vac14Q80WQ2 782 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Msantd1Q8BIL2 278 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Snx8Q8CFD4 459 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dclre1cQ8K4J0 705 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Uroc1Q8VC12 676 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Slc22a19Q8VCA0 551 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr1484Q8VEU6 315 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rgs18Q99PG4 235 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ddx59Q9DBN9 619 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Trim2Q9ESN6 744 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nphs1Q9QZS7 1256 aa9.2□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Zfp811A0A0J9YU71 552 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Fam217bA2AJW5 387 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Zfp969A2ART2 485 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Zfp973A2BE20 318 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Kbtbd2G3X9X1 623 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Clcn7O70496 803 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Hcn4O70507 1186 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 RxrbP28704 520 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ppp3cbP48453 525 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mylk4Q5SUV5 386 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rabl6Q5U3K5 725 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Antxr2Q6DFX2 487 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 DgkqQ6P5E8 934 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Tmem164Q6PHN7 296 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dnajc14Q921R4 703 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rilpl2Q99LE1 197 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Clcc1Q99LI2 539 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 MmadhcQ99LS1 296 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Trappc5Q9CQA1 188 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 NarfQ9CYQ7 462 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mtif3Q9CZD5 276 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ttyh1Q9D3A9 450 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dnajb4Q9D832 337 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Natd1Q9DBW3 110 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Bscl2Q9Z2E9 383 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ahdc1Q6PAL7 1594 aaKnown RBP9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm4302E9PX25 294 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm6811E9Q3Y8 510 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Sema3aO08665 772 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Icam1P13597 537 aaKnown RBP9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 DcnP28654 354 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 NadkP58058 439 aa9.19□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Trpv5P69744 723 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms