RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ARMC3Q5W041 872 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 TANGO2Q6ICL3 276 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 SRLQ86TD4 932 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 METTL3Q86U44 580 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 LRRC6Q86X45 466 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 ARFGAP2Q8N6H7 521 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 NAT16Q8N8M0 369 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CDKL2Q92772 493 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 MFSD3Q96ES6 412 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CERS2Q96G23 380 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 TRIB3Q96RU7 358 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 RANBP9Q96S59 729 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 MYADMQ96S97 322 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 MRM3Q9HC36 420 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 PPANQ9NQ55 473 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CA14Q9ULX7 337 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 TCAF1Q9Y4C2 921 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 IKBKGQ9Y6K9 419 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CHD6Q8TD26 2715 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 SPTBN2O15020 2390 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ZCWPW2A0A1B0GU75 182 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 FOXO6A8MYZ6 492 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 HOXC11O43248 304 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-221ENST00000641573 NARSO43776 548 aaKnown RBP13.2□□□□□ -0.3
PHGDH-221ENST00000641573 NFATC1O95644 943 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 NDST3O95803 873 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 SRCP12931 536 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ARSAP15289 507 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ATP1A2P50993 1020 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 SULT2A1Q06520 285 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 MSLNQ13421 630 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-221ENST00000641573 NAB1Q13506 487 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 SEPT6Q14141 434 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 GALNT3Q14435 633 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 PDGFRLQ15198 375 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 KIAA0907Q7Z7F0 614 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-221ENST00000641573 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 C1orf210Q8IVY1 113 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-221ENST00000641573 E2F7Q96AV8 911 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ZFYVE19Q96K21 471 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 FBXO10Q9UK96 956 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 CHKBQ9Y259 395 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 RAI2Q9Y5P3 530 aa13.2□□□□□ -0.3
PHGDH-221ENST00000641573 IQANK1A0A1B0GTG1 560 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 CCDC78A2IDD5 438 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 TRIM24O15164 1050 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 UGT1A9O60656 530 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 FAM155BO75949 473 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 IGSF6O95976 241 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 DCNP07585 359 aaKnown RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 CISD3P0C7P0 127 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 KRT15P19012 456 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 GBP2P32456 591 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 CSNK1DP48730 415 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 STK19P49842 368 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 AP1S1P61966 158 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 TRAF2Q12933 501 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 SMAD1Q15797 465 aaKnown RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 MBLAC2Q68D91 279 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 VITQ6UXI7 678 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 TRABD2AQ86V40 505 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ATP2A3Q93084 1043 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 RPL10LQ96L21 214 aaKnown RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ZNF778Q96MU6 729 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 SELENOSQ9BQE4 189 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 FAM83CQ9BQN1 747 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 TM6SF2Q9BZW4 377 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 EBF3Q9H4W6 596 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 UGT1A7Q9HAW7 530 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 UGT1A10Q9HAW8 530 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 UGT1A8Q9HAW9 530 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 C20orf96Q9NUD7 363 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-221ENST00000641573 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ADAM21Q9UKJ8 722 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 HS3ST2Q9Y278 367 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 PCDHGC4Q9Y5F7 938 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ACTL7BQ9Y614 415 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms