RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TUBA4AP68366 448 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 LAMTOR4Q0VGL1 99 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 LRP8Q14114 963 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 GRTP1Q5TC63 336 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 PPP4R4Q6NUP7 873 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 CAMK1DQ8IU85 385 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 DCBLD1Q8N8Z6 715 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 SCAIQ8N9R8 606 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
SCARB2-227ENST00000640957 C3orf30Q96M34 536 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 RNF145Q96MT1 663 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 MINDY3Q9H8M7 445 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ATAD3AQ9NVI7 634 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 CSADQ9Y600 493 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 BRCA2P51587 3418 aa13.83□□□□□ -0.19
SCARB2-227ENST00000640957 PLA2G6O60733 806 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 ALDH1A2O94788 518 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SHMT2P34897 504 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCARB2-227ENST00000640957 LAPTM5Q13571 262 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SLC12A1Q13621 1099 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 ABRAXAS1Q6UWZ7 409 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 ABI1Q8IZP0 508 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 OR2T34Q8NGX1 318 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 OR2T3Q8NH03 318 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 PSMA8Q8TAA3 256 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 ELMO2Q96JJ3 720 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 CCDC138Q96M89 665 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 CAMKK2Q96RR4 588 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SMARCAD1Q9H4L7 1026 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SLAMF8Q9P0V8 285 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 A8MV72 311 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-227ENST00000640957 PPEF2O14830 753 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 OGTO15294 1046 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 VTNP04004 478 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 TPSB2P20231 275 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 FASP25445 335 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 TPSAB1Q15661 275 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SMUG1Q53HV7 270 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 UBE2UQ5VVX9 321 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 CRTC3Q6UUV7 619 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 CCDC81Q6ZN84 652 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 CENPLQ8N0S6 344 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-227ENST00000640957 OR10Q1Q8NGQ4 319 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SPATA22Q8NHS9 363 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 TBCBQ99426 244 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 ALOXE3Q9BYJ1 711 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 GBA3Q9H227 469 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 DPEP3Q9H4B8 488 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 BFARQ9NZS9 450 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 BTRCQ9Y297 605 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 RAD54BQ9Y620 910 aa13.83□□□□□ -0.2
SCARB2-227ENST00000640957 GPR25O00155 361 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 MAFGO15525 162 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 ZBTB24O43167 697 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-227ENST00000640957 CLPXO76031 633 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 BAIAP3O94812 1187 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 DDHD2O94830 711 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 AHSGP02765 367 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SNRPB2P08579 225 aaKnown RBP13.82□□□□□ -0.2
SCARB2-227ENST00000640957 AGXTP21549 392 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 GSSP48637 474 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 FAM83EQ2M2I3 478 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 TSTD2Q5T7W7 516 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 ATF7IP2Q5U623 682 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 ERMP1Q7Z2K6 904 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SLC22A16Q86VW1 577 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 RALGPS2Q86X27 583 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-227ENST00000640957 HPDLQ96IR7 371 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 VPS33BQ9H267 617 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 RAD21L1Q9H4I0 556 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SLC2A6Q9UGQ3 507 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 TMED5Q9Y3A6 229 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 BOLA1Q9Y3E2 137 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 TRAF6Q9Y4K3 522 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 MSCO60682 206 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SUPT7LO94864 414 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 PGK1P00558 417 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 C8BP07358 591 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 PFKMP08237 780 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 ECT2LQ008S8 904 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-227ENST00000640957 STX5Q13190 355 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 PHKG1Q16816 387 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 MEP1AQ16819 746 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 NOMO2Q5JPE7 1267 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SLCO6A1Q86UG4 719 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 TMEM151AQ8N4L1 468 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 KCNA7Q96RP8 456 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 LHX5Q9H2C1 402 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 PKD2L2Q9NZM6 624 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 TCAF1Q9Y4C2 921 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 ZCWPW2A0A1B0GU75 182 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms