RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RALGDSQ12967 914 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.89■■□□□ 1.9
VEGFA-231ENST00000640499 P3H4Q92791 437 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 POLR1EQ9GZS1 481 aaKnown RBP26.89■■□□□ 1.9
VEGFA-231ENST00000640499 BRD8Q9H0E9 1235 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 AASDHPPTQ9NRN7 309 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 TP53BP1Q12888 1972 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-231ENST00000640499 MIF4GDA9UHW6 222 aaKnown RBP26.88■■□□□ 1.89
VEGFA-231ENST00000640499 H0Y8X5 98 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 NEMP1O14524 444 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 PPP1R12AO14974 1030 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-231ENST00000640499 SOCS5O75159 536 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 PDHA1P08559 390 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 MMP12P39900 470 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 CTSKP43235 329 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 ITKQ08881 620 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 WASHC5Q12768 1159 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 PTPRRQ15256 657 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 KDM7AQ6ZMT4 941 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 MFSD2AQ8NA29 543 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 WRAP53Q9BUR4 548 aaKnown RBP26.88■■□□□ 1.89
VEGFA-231ENST00000640499 ZDHHC5Q9C0B5 715 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 C10orf88Q9H8K7 445 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 CDV3Q9UKY7 258 aaKnown RBP26.88■■□□□ 1.89
VEGFA-231ENST00000640499 RAI2Q9Y5P3 530 aa26.88■■□□□ 1.89
VEGFA-231ENST00000640499 PGLSO95336 258 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 PRLP01236 227 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 HNRNPA2B1P22626 353 aaKnown RBP26.87■■□□□ 1.89
VEGFA-231ENST00000640499 CLDN2P57739 230 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 TEAD4Q15561 434 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 HLA-BQ31612 363 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 GCNT7Q6ZNI0 430 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 ZC3H18Q86VM9 953 aaKnown RBP26.87■■□□□ 1.89
VEGFA-231ENST00000640499 SPATS2Q86XZ4 545 aaKnown RBP26.87■■□□□ 1.89
VEGFA-231ENST00000640499 PIH1D2Q8WWB5 315 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 ASB12Q8WXK4 309 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 BMFQ96LC9 184 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 SMIM14Q96QK8 99 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 DNAAF2Q9NVR5 837 aaKnown RBP26.87■■□□□ 1.89
VEGFA-231ENST00000640499 PCDHB9Q9Y5E1 797 aa26.87■■□□□ 1.89
VEGFA-231ENST00000640499 APOC4-APOC2K7ER74 178 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 APOC2P02655 101 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 GM2AP17900 193 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 PTPN3P26045 913 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 SKOR1P84550 965 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 NOMO1Q15155 1222 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 CFAP58Q5T655 872 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 BZW1Q7L1Q6 419 aaKnown RBP26.86■■□□□ 1.89
VEGFA-231ENST00000640499 TFB1MQ8WVM0 346 aaKnown RBP26.86■■□□□ 1.89
VEGFA-231ENST00000640499 CENPTQ96BT3 561 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 LENG8Q96PV6 779 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-231ENST00000640499 FNDC3AQ9Y2H6 1198 aaKnown RBP26.86■■□□□ 1.89
VEGFA-231ENST00000640499 TTLL3Q9Y4R7 772 aa26.86■■□□□ 1.89
VEGFA-231ENST00000640499 TLR4O00206 839 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 XPAP23025 273 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-231ENST00000640499 ID4P47928 161 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 ELP6Q0PNE2 266 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 TEX44Q53QW1 395 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 PRAMEF14Q5SWL7 426 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 MEI1Q5TIA1 1274 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 DPPA4Q7L190 304 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 UBL4BQ8N7F7 174 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 ACTL9Q8TC94 416 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 PDCD6IPQ8WUM4 868 aaKnown RBP26.85■■□□□ 1.89
VEGFA-231ENST00000640499 TADA1Q96BN2 335 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 AGAP3Q96P47 875 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 QKIQ96PU8 341 aaKnown RBP eCLIP26.85■■□□□ 1.89
VEGFA-231ENST00000640499 FAM118BQ9BPY3 351 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 GAREM1Q9H706 876 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 SEPT10Q9P0V9 454 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 COQ6Q9Y2Z9 468 aa26.85■■□□□ 1.89
VEGFA-231ENST00000640499 TCRBV7S2A1N4TA0A589 114 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 POM121BA6NF01 834 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 A8MX80 341 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 CES1P23141 567 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 CD68P34810 354 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-231ENST00000640499 LIG3P49916 1009 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 NXPH1P58417 271 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 FAM193AP78312 1265 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 OTUD4Q01804 1114 aaKnown RBP26.84■■□□□ 1.89
VEGFA-231ENST00000640499 KLF1Q13351 362 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-231ENST00000640499 STAT4Q14765 748 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 SHBQ15464 509 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 ZNF423Q2M1K9 1284 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 UAP1L1Q3KQV9 507 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 ADAT2Q7Z6V5 191 aaKnown RBP26.84■■□□□ 1.89
VEGFA-231ENST00000640499 ABI3BPQ7Z7G0 1075 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 IQCHQ86VS3 1027 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 ZSCAN30Q86W11 494 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 CXorf40AQ8TE69 158 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 RTKNQ9BST9 563 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 TDRD1Q9BXT4 1180 aaKnown RBP26.84■■□□□ 1.89
VEGFA-231ENST00000640499 CAAP1Q9H8G2 361 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 B4GALT6Q9UBX8 382 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 PPIL1Q9Y3C6 166 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 HS3ST3A1Q9Y663 406 aa26.84■■□□□ 1.89
VEGFA-231ENST00000640499 DCDC2BA2VCK2 349 aa26.83■■□□□ 1.89
VEGFA-231ENST00000640499 TM7SF2O76062 418 aa26.83■■□□□ 1.89
VEGFA-231ENST00000640499 CPP00450 1065 aa26.83■■□□□ 1.89
VEGFA-231ENST00000640499 C6P13671 934 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms