RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FAM45AQ8TCE6 357 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FAR2Q96K12 515 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 BIRC8Q96P09 236 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TCF12Q99081 682 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SMOQ99835 787 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 DCUN1D5Q9BTE7 237 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 UPF3AQ9H1J1 476 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 IL1RL2Q9HB29 575 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CRTAC1Q9NQ79 661 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SMOXQ9NWM0 555 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 AURKCQ9UQB9 309 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PIN4Q9Y237 131 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 AAR2Q9Y312 384 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TMX2-CTNND1H3BSU7 103 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 DLGAP1O14490 977 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 ZSCAN9O15535 394 aaPredicted RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 CACNG3O60359 315 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 TPST1O60507 370 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 PMPCBO75439 489 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 POLD2P49005 469 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 NME5P56597 212 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 NOMO2Q5JPE7 1267 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 RWDD4Q6NW29 188 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 GPR141Q7Z602 305 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 EPHX4Q8IUS5 362 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 FUNDC1Q8IVP5 155 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 CBR4Q8N4T8 237 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 AFAP1L2Q8N4X5 818 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 ZMIZ2Q8NF64 920 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 ISOC1Q96CN7 298 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 ARHGEF38Q9NXL2 777 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 GPRC5DQ9NZD1 345 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 TDRKHQ9Y2W6 561 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 UBFD1O14562 309 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 PSMD3O43242 534 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 FOXD2O60548 495 aaPredicted RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 SEC24DO94855 1032 aaPredicted RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 STAMBPO95630 424 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 HNRNPCP07910 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 BMP2P12643 396 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 POU4F1Q01851 419 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 FAM83EQ2M2I3 478 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 KLHDC8BQ8IXV7 354 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 CPNE9Q8IYJ1 553 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 GFM2Q969S9 779 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 C12orf43Q96C57 262 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 C3orf30Q96M34 536 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 EML4Q9HC35 981 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 GLOD4Q9HC38 313 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 CDC14AQ9UNH5 594 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF510Q9Y2H8 683 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 TRAF6Q9Y4K3 522 aa10.98□□□□□ -0.65
SNIP1-204ENST00000638725 PDCD11Q14690 1871 aaKnown RBP10.98□□□□□ -0.65
SNIP1-204ENST00000638725 C9JVG2 144 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 NME4O00746 187 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ALDOCP09972 364 aaKnown RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 IMPDH2P12268 514 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ETFBP38117 255 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 C16orf72Q14CZ0 275 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 IL31Q6EBC2 164 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TTC33Q6PID6 262 aaPredicted RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 DHRS4L2Q6PKH6 230 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 MOB2Q70IA6 237 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ANKRD49Q8WVL7 239 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TMEM40Q8WWA1 233 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 PGAP3Q96FM1 320 aaPredicted RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TSGA13Q96PP4 275 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 FCRL5Q96RD9 977 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 OSBPL6Q9BZF3 934 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 SIK2Q9H0K1 926 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 GSTO2Q9H4Y5 243 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TREX1Q9NSU2 369 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 GIMAP2Q9UG22 337 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 EGFL7Q9UHF1 273 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 MTF2Q9Y483 593 aaPredicted RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TIMM13Q9Y5L4 95 aaPredicted RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ADM5C9JUS6 153 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 NR5A2O00482 541 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 XPOTO43592 962 aaKnown RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 CLIC3O95833 236 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 LTA4HP09960 611 aaKnown RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 HSPA8P11142 646 aaKnown RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 CXCR3P49682 368 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 NUP107P57740 925 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 YBX1P67809 324 aaKnown RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 PPIL2Q13356 520 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 KCTD21Q4G0X4 260 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 AGAP9Q5VTM2 703 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 NEPROQ6NW34 567 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 LARP4Q71RC2 724 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF554Q86TJ5 538 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 FAM35AQ86V20 835 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 GPR180Q86V85 440 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms