RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 SWT1Q5T5J6 900 aaKnown RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 RNF168Q8IYW5 571 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 TMEM151AQ8N4L1 468 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 SLC22A17Q8WUG5 538 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 PHF21BQ96EK2 531 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 TACO1Q9BSH4 297 aaKnown RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 CINPQ9BW66 212 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 PDFQ9HBH1 243 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 ACOT9Q9Y305 439 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 CPQQ9Y646 472 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 LOC100653049A0A140TA62 436 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 HEATR9A2RTY3 570 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 CCDC162PA2VCL2 907 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 H0Y626 953 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 KRT34O76011 436 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 TGDSO95455 350 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 GOT2P00505 430 aaKnown RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 ESRRAP11474 423 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 RAG1P15918 1043 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 GABRR2P28476 465 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 ABL2P42684 1182 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 SLC12A2P55011 1212 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 CSE1LP55060 971 aaKnown RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 RAB10P61026 200 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 DSG1Q02413 1049 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 ZNF177Q13360 481 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 C11orf91Q3C1V1 193 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 TRIM42Q8IWZ5 723 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 KLHDC8BQ8IXV7 354 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 TEX26Q8N6G2 289 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 C2CD4AQ8NCU7 369 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 LPCAT1Q8NF37 534 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 PTCD3Q96EY7 689 aaKnown RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 CADM1Q9BY67 442 aaKnown RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 HCFC1R1Q9NWW0 138 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 UBA2Q9UBT2 640 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-225ENST00000638099 INSL5Q9Y5Q6 135 aa7.94□□□□□ -1.14
GABRB3-225ENST00000638099 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 UBA6A0AVT1 1052 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 INSIG1O15503 277 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 DLX3O60479 287 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 PRAMEF12O95522 483 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 MPOP05164 745 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CKMP06732 381 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CNPP09543 421 aaKnown RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CCDC166P0CW27 439 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CTPS1P17812 591 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 HDCP19113 662 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 ARF5P84085 180 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 GPR158Q5T848 1215 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 KIAA0930Q6ICG6 404 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 LRRC8EQ6NSJ5 796 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 TMEM207Q6UWW9 146 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 WDR75Q8IWA0 830 aaKnown RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 FAM13CQ8NE31 585 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 ADAMTS19Q8TE59 1207 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 NSL1Q96IY1 281 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 OR52B2Q96RD2 323 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 LRMDAQ9H2I8 198 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 COG4Q9H9E3 785 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 VPS45Q9NRW7 570 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 KCNK4Q9NYG8 393 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 TAS2R1Q9NYW7 299 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CXXC1Q9P0U4 656 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 NKX1-2Q9UD57 310 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 PACSIN3Q9UKS6 424 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 BACE2Q9Y5Z0 518 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 PRUNE2Q8WUY3 3088 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 LCHNA4D1U4 455 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CFAP73A6NFT4 308 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 B2RBV5 119 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 GYG2O15488 501 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 TGM5O43548 720 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 TRIM13O60858 407 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 SORBS2O94875 1100 aaKnown RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 PIGNO95427 931 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CD160O95971 181 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 SERPINF2P08697 491 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 PAMP19021 973 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 EPHA3P29320 983 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 KCNC1P48547 511 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 IDH3AP50213 366 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 TUBB3Q13509 450 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 SLC12A1Q13621 1099 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 VEPH1Q14D04 833 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CYTH1Q15438 398 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 PDCD2Q16342 344 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CCDC153Q494R4 210 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 ACCSLQ4AC99 568 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 ARL13AQ5H913 290 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 RABGAP1LQ5R372 815 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 ADGRF1Q5T601 910 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 TMEM198Q66K66 360 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 CXorf57Q6NSI4 855 aaKnown RBP7.93□□□□□ -1.14
GABRB3-225ENST00000638099 GAREM2Q75VX8 874 aa7.93□□□□□ -1.14
GABRB3-225ENST00000638099 APCDD1Q8J025 514 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms