RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 HMBSP08397 361 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 SERPINF2P08697 491 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 PIK3R1P27986 724 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ATP5C1P36542 298 aaKnown RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 SLC11A2P49281 568 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 EPHB1P54762 984 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 KLC1Q07866 573 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TBL3Q12788 808 aaKnown RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 DLG1Q12959 904 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 CYLC2Q14093 348 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 ZNF460Q14592 562 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 NXNQ6DKJ4 435 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 IRGCQ6NXR0 463 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 FRMD7Q6ZUT3 714 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 PTAR1Q7Z6K3 402 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 SDCCAG8Q86SQ7 713 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 MFSD6LQ8IWD5 586 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 PHTF2Q8N3S3 785 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 KYQ8NBH2 561 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 OR13J1Q8NGT2 312 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ZNF184Q99676 751 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TTPALQ9BTX7 342 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 NUF2Q9BZD4 464 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 GPR62Q9BZJ7 368 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 POPDC3Q9HBV1 291 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 S100A14Q9HCY8 104 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 IGSF5Q9NSI5 407 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 DNMT3LQ9UJW3 386 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 SLC27A5Q9Y2P5 690 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 NEMP1O14524 444 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 CES1P23141 567 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 EPHA3P29320 983 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 TUFMP49411 452 aaKnown RBP12.19□□□□□ -0.46
CLN8-212ENST00000637083 ACVR1Q04771 509 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 RFTN1Q14699 578 aaPredicted RBP12.19□□□□□ -0.46
CLN8-212ENST00000637083 MAPRE2Q15555 327 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 TRIM67Q6ZTA4 783 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 NPAS4Q8IUM7 802 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 LSMEM2Q8N112 164 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 GPR150Q8NGU9 434 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 BRSK1Q8TDC3 778 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 GPR152Q8TDT2 470 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 HDAC10Q969S8 669 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 UBXN10Q96LJ8 280 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 TTLL2Q9BWV7 592 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 VCXQ9H320 206 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 WDR55Q9H6Y2 383 aaPredicted RBP12.19□□□□□ -0.46
CLN8-212ENST00000637083 EFCAB1Q9HAE3 211 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 CYP4F11Q9HBI6 524 aa12.19□□□□□ -0.46
CLN8-212ENST00000637083 SLC38A8A6NNN8 435 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 TBC1D4O60343 1298 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 ACSL4O60488 711 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 TRPA1O75762 1119 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 CRTAMO95727 393 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 BAG2O95816 211 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 ATXN1LP0C7T5 689 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 CCDC166P0CW27 439 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 OGNP20774 298 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 ETFBP38117 255 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 SLC11A1P49279 550 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 MTTPP55157 894 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 CDH4P55283 916 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 ARHGEF6Q15052 776 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 RALGPS1Q5JS13 557 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 RBM20Q5T481 1227 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 RNF19BQ6ZMZ0 732 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 DBF4BQ8NFT6 615 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 NRG4Q8WWG1 115 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 MAELQ96JY0 434 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 NACA2Q9H009 215 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 MRPL40Q9NQ50 206 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 MARCH5Q9NX47 278 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 GTSE1Q9NYZ3 720 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLN8-212ENST00000637083 SEPT3Q9UH03 358 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 VPS28Q9UK41 221 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 LDB2O43679 373 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 SMIM24O75264 130 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 RPP40O75818 363 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 S1PR4O95977 384 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 XIAPP98170 497 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 DSG1Q02413 1049 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 NSUN2Q08J23 767 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLN8-212ENST00000637083 DUSP4Q13115 394 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 GSTA3Q16772 222 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 LGI2Q8N0V4 545 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 KDM1BQ8NB78 822 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 TXNDC5Q8NBS9 432 aaKnown RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 SLC26A7Q8TE54 656 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 CAPNS2Q96L46 248 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 NDNQ99608 321 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 TTC1Q99614 292 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms