RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SPDL1Q96EA4 605 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 TMA16Q96EY4 203 aaKnown RBP18.98■□□□□ 0.63
CLN5-216ENST00000636780 CASD1Q96PB1 797 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 MRPL46Q9H2W6 279 aaKnown RBP18.98■□□□□ 0.63
CLN5-216ENST00000636780 FBXO44Q9H4M3 255 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 TMEM248Q9NWD8 314 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 SMPD4Q9NXE4 827 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 CHD7Q9P2D1 2997 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 ALDH2P05091 517 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 CDK18Q07002 472 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 LBRQ14739 615 aaKnown RBP18.98■□□□□ 0.63
CLN5-216ENST00000636780 LHX8Q68G74 356 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 ZNF549Q6P9A3 640 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 TMEM154Q6P9G4 183 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 CILP2Q8IUL8 1156 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 PCDH20Q8N6Y1 951 aaKnown RBP18.98■□□□□ 0.63
CLN5-216ENST00000636780 OR9I1Q8NGQ6 314 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 BTN2A3PQ96KV6 586 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 C8orf48Q96LL4 319 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 C1orf74Q96LT6 269 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 PCDHB7Q9Y5E2 793 aa18.98■□□□□ 0.63
CLN5-216ENST00000636780 A0A1B0GTL3 188 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 CCDC189A1A4V9 331 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 TBKBP1A7MCY6 615 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 A8MT66 165 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PSMD3O43242 534 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 GOT2P00505 430 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 SCNN1BP51168 640 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 ZNF135P52742 658 aaPredicted RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 ASPHQ12797 758 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 TRMT5Q32P41 509 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 KIAA0930Q6ICG6 404 aaPredicted RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 FUT10Q6P4F1 479 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 LRRC8DQ7L1W4 858 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PDCD6IPQ8WUM4 868 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 ESAMQ96AP7 390 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PTERQ96BW5 349 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 UBE2OQ9C0C9 1292 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 NACA2Q9H009 215 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 C1orf21Q9H246 121 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 BPIFA1Q9NP55 256 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 NCKIPSDQ9NZQ3 722 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 DLGAP2Q9P1A6 1054 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 FAM50BQ9Y247 325 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 COPG1Q9Y678 874 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 ZFP37Q9Y6Q3 630 aaPredicted RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 TMEM114B3SHH9 223 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 S1PR4O95977 384 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 FAM189BP81408 668 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 BLMHQ13867 455 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 TSNAXIP1Q2TAA8 658 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 C6orf163Q5TEZ5 329 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 BEND5Q7L4P6 421 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 DSELQ8IZU8 1212 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 GALPQ9UBC7 116 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 VWA7Q9Y334 891 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PCDHGC4Q9Y5F7 938 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 SPO11Q9Y5K1 396 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 HEATR9A2RTY3 570 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 CCDC162PA2VCL2 907 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 MAP3K7O43318 606 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 SKIP12755 728 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 XRCC1P18887 633 aaPredicted RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 PAMP19021 973 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PEX2P28328 305 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 THOP1P52888 689 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 MS4A2Q01362 244 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 NSUN2Q08J23 767 aaKnown RBP eCLIP18.97■□□□□ 0.63
CLN5-216ENST00000636780 SERINC3Q13530 473 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 FRG1Q14331 258 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 DBN1Q16643 649 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PGM2L1Q6PCE3 622 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 ATP6V0D2Q8N8Y2 350 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 NSUN5Q96P11 429 aaKnown RBP18.97■□□□□ 0.63
CLN5-216ENST00000636780 S100A14Q9HCY8 104 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 VPS45Q9NRW7 570 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 NDE1Q9NXR1 346 aa18.97■□□□□ 0.63
CLN5-216ENST00000636780 PQBP1O60828 265 aaKnown RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 SMNDC1O75940 238 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLN5-216ENST00000636780 KLKB1P03952 638 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 SULT2A1Q06520 285 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 ZNF33AQ06730 810 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 UGP2Q16851 508 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 SFT2D3Q587I9 215 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 ZNF512Q96ME7 567 aaPredicted RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 TRIM62Q9BVG3 475 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 TLR8Q9NR97 1041 aaKnown RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 ARHGAP26Q9UNA1 814 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 RPL26L1Q9UNX3 145 aaKnown RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 CDYLQ9Y232 598 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 ANKRD6Q9Y2G4 727 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 UBA6A0AVT1 1052 aaPredicted RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 SUPT7LO94864 414 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 INHAP05111 366 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 RAG1P15918 1043 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 TACR2P21452 398 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 OR1D2P34982 312 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 HTRA3P83110 453 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 TIAL1Q01085 375 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLN5-216ENST00000636780 BTKQ06187 659 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms