RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PLA2G4EQ3MJ16 856 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 TMEM207Q6UWW9 146 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 AGMOQ6ZNB7 445 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 HERC6Q8IVU3 1022 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 ARHGAP18Q8N392 663 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 B4GALNT2Q8NHY0 566 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CNDP1Q96KN2 507 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 TMEM79Q9BSE2 394 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 Q9H521 79 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CACNA2D2Q9NY47 1150 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 BCAS2O75934 225 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 F9P00740 461 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 RPS6KA3P51812 740 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 FOXA1P55317 472 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 GRM2Q14416 872 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 UGP2Q16851 508 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 TRIML2Q8N7C3 387 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 ZFAND2BQ8WV99 257 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 PRICKLE1Q96MT3 831 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 MRPL57Q9BQC6 102 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 EPS15L1Q9UBC2 864 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 ANKRD6Q9Y2G4 727 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 A0A1W2PQH9 124 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 FOXD2O60548 495 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 ANXA9O76027 345 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 ATP5F1P24539 256 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 LRPAP1P30533 357 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 ARL1P40616 181 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 RPL5P46777 297 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 SLC5A3P53794 718 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 COG7P83436 770 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 GRB14Q14449 540 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 FUT11Q495W5 492 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 PM20D1Q6GTS8 502 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 LIMS2Q7Z4I7 341 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 CANT1Q8WVQ1 401 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 TBATAQ96M53 351 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 BTBD9Q96Q07 612 aa14.11□□□□□ -0.15
CACNA1A-228ENST00000636610 A0A1B0GTL3 188 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 ARHGEF37A1IGU5 675 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 H2AFYO75367 372 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 IPO13O94829 963 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 PSMC3P17980 439 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 CD52P31358 61 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 GRK4P32298 578 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 APLP1P51693 650 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 PLOD1Q02809 727 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 LSAMPQ13449 338 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 TRIM25Q14258 630 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 PFKFB4Q16877 469 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 ALFQ53S48 1182 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 KRT80Q6KB66 452 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 NUP93Q8N1F7 819 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 PSMG2Q969U7 264 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 HBEGFQ99075 208 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 VAT1Q99536 393 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 OSER1Q9NX31 292 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 VTI1BQ9UEU0 232 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 TRAF6Q9Y4K3 522 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 UBA6A0AVT1 1052 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 TRIM38O00635 465 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 GNAO1P09471 354 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 GALNT3Q14435 633 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 XKR4Q5GH76 650 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 RAB41Q5JT25 222 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 HECTD2Q5U5R9 776 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 SPPL2CQ8IUH8 684 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 MARVELD2Q8N4S9 558 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 TMEM102Q8N9M5 508 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 NUDT8Q8WV74 236 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 HMCESQ96FZ2 354 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 CCT7Q99832 543 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 SOX17Q9H6I2 414 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 FAM50BQ9Y247 325 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 ARL5AQ9Y689 179 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 COMMD3-BMI1R4GMX3 469 aa14.1□□□□□ -0.15
CACNA1A-228ENST00000636610 E9PAM4 449 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 MATN3O15232 486 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 PYGLP06737 847 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 LINC00032P0C843 101 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 AXLP30530 894 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 MAPK10P53779 464 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 PIWIL4Q7Z3Z4 852 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 DGCR14Q96DF8 476 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 EXOC2Q96KP1 924 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 TIMM22Q9Y584 194 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 HS3ST4Q9Y661 456 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 PRSS51A0A1B0GVH4 220 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 HEATR9A2RTY3 570 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 TRPC5OSA6NMA1 111 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 M0QZ92 97 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 UBXN8O00124 270 aa14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 SCAMP3O14828 347 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-228ENST00000636610 PCSK1P29120 753 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms