RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ATG9AQ7Z3C6 839 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ANKRD23Q86SG2 305 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 TMPRSS12Q86WS5 348 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 WDR63Q8IWG1 891 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 CCDC89Q8N998 374 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 FAM71DQ8N9W8 422 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PNLDC1Q8NA58 520 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ZUFSPQ96AP4 578 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 FKBP10Q96AY3 582 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 R3HDM4Q96D70 268 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 RNF125Q96EQ8 232 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 LYZL4Q96KX0 146 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PIGSQ96S52 555 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 MPHOSPH8Q99549 860 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 NPAS1Q99742 590 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 DPCDQ9BVM2 203 aaPredicted RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PUS3Q9BZE2 481 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 HIPK2Q9H2X6 1198 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 TDRD3Q9H7E2 651 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ACAD9Q9H845 621 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PLEKHA2Q9HB19 425 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 AASSQ9UDR5 926 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 NRBP1Q9UHY1 535 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC45A1Q9Y2W3 748 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 RPS6KL1Q9Y6S9 549 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ZFHX4Q86UP3 3567 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 NCOR1O75376 2440 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 DMXL1Q9Y485 3027 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP3A7-CYP3A51PA0A087WV96 503 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3DA0A087WVF3 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3IA0A087WXS9 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3EA0A087X179 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3KA0A087X1G2 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 A0A1W2PPH5 198 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 DYTNA2CJ06 578 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3BA6NDS4 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3FA6NER0 549 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 SERINC4A6NH21 518 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3LB9A6J9 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 KLK10O43240 276 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TIMM44O43615 452 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TMPRSS11DO60235 418 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 USO1O60763 962 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 GUCY1B2O75343 617 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TJP3O95049 919 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 NXPH3O95157 252 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RTN3O95197 1032 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PDE8BO95263 885 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 FESP07332 822 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 DLDP09622 509 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3HP0C7X1 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CETPP11597 493 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ALADP13716 330 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TNNT1P13805 278 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CPA1P15085 419 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CHN1P15882 459 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CREB1P16220 341 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TNFRSF1BP20333 461 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP3A7P24462 503 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ATP5F1P24539 256 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 HOXD9P28356 352 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 MCM5P33992 734 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 GRK5P34947 590 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PGM1P36871 562 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PCP4P48539 62 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PLCD1P51178 756 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RCAN1P53805 252 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CLNS1AP54105 237 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 FOXL2P58012 376 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP4F2P78329 520 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PRKCZQ05513 592 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CAMK1Q14012 370 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 SEMA3AQ14563 771 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RBMS2Q15434 407 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 GPR68Q15743 365 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP1B1Q16678 543 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ANKRD40Q6AI12 368 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3GQ6DHY5 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3CQ6IPX1 549 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 C16orf89Q6UX73 402 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 C18orf65Q6ZTR6 163 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 FASTKD5Q7L8L6 764 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PIP4P1Q86T03 277 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ERO1BQ86YB8 467 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ARMC8Q8IUR7 673 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D3Q8IZP1 549 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 SIRT6Q8N6T7 355 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PNPLA1Q8N8W4 532 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 OR52L2PQ8NGH6 319 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 C16orf52Q8NHV5 167 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RP9Q8TA86 221 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D22AQ8WUA7 517 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 UCMAQ8WVF2 138 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 GLMPQ8WWB7 406 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 XAGE5Q8WWM1 108 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ZKSCAN4Q969J2 545 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 TEKT1Q969V4 418 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ARRDC3Q96B67 414 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RITA1Q96K30 269 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms