RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TMCC1O94876 653 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 IGSF6O95976 241 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 BPIFB4P59827 614 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 NRG1Q02297 640 aaPredicted RBP20.31■□□□□ 0.84
TARDBP-228ENST00000629725 ARHGEF7Q14155 803 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 C2CD6Q53TS8 623 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 MANEALQ5VSG8 457 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 BORAQ6PGQ7 559 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 OGFOD3Q6PK18 319 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 TMPRSS9Q7Z410 1059 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 ZNF354CQ86Y25 554 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 SLITRK4Q8IW52 837 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 FAM46DQ8NEK8 389 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 ZNF564Q8TBZ8 553 aaPredicted RBP20.31■□□□□ 0.84
TARDBP-228ENST00000629725 PDXPQ96GD0 296 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 WDR92Q96MX6 357 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 B3GNT4Q9C0J1 378 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 AKAP7Q9P0M2 348 aaPredicted RBP20.31■□□□□ 0.84
TARDBP-228ENST00000629725 TMEM59LQ9UK28 342 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 DNAJC12Q9UKB3 198 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 MFHAS1Q9Y4C4 1052 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 DGKBQ9Y6T7 804 aa20.31■□□□□ 0.84
TARDBP-228ENST00000629725 ZSCAN5CA6NGD5 496 aaPredicted RBP20.3■□□□□ 0.84
TARDBP-228ENST00000629725 STMND1H3BQB6 276 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 BUB1O43683 1085 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 KDELR3O43731 214 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 SUOXP51687 545 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 ATP11AP98196 1134 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 C14orf28Q4W4Y0 310 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 TAF8Q7Z7C8 310 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 JPH3Q8WXH2 748 aaPredicted RBP20.3■□□□□ 0.84
TARDBP-228ENST00000629725 SEMA6CQ9H3T2 930 aa20.3■□□□□ 0.84
TARDBP-228ENST00000629725 UTP20O75691 2785 aaKnown RBP20.3■□□□□ 0.84
TARDBP-228ENST00000629725 ARHGEF17Q96PE2 2063 aaPredicted RBP20.3■□□□□ 0.84
TARDBP-228ENST00000629725 NUDT21O43809 227 aaKnown RBP20.29■□□□□ 0.84
TARDBP-228ENST00000629725 PCCBP05166 539 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 GP1BBP13224 206 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 ADRA1BP35368 520 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 RHOAP61586 193 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 HLTFQ14527 1009 aaKnown RBP eCLIP20.29■□□□□ 0.84
TARDBP-228ENST00000629725 MAP9Q49MG5 647 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 KCTD16Q68DU8 428 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 ARCQ7LC44 396 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 PIM3Q86V86 326 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 IRF2BP1Q8IU81 584 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 FAM71AQ8IYT1 594 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 CASKIN2Q8WXE0 1202 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 HMCESQ96FZ2 354 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 SLC12A9Q9BXP2 914 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 EPN3Q9H201 632 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 DPEP2Q9H4A9 486 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 SIX2Q9NPC8 291 aa20.29■□□□□ 0.84
TARDBP-228ENST00000629725 B4DGG1 531 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 FAM72CH0Y354 149 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 ATP1A2P50993 1020 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 KCNAB2Q13303 367 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 MTM1Q13496 603 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 C16orf72Q14CZ0 275 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 AGERQ15109 404 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 UGP2Q16851 508 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 CDO1Q16878 200 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 FAM72AQ5TYM5 149 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 FAM72DQ6L9T8 149 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 FAM72BQ86X60 149 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 SFTPA2Q8IWL1 248 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 NETO2Q8NC67 525 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 MSANTD4Q8NCY6 345 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 HCAR2Q8TDS4 363 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 TBC1D31Q96DN5 1066 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 NCAPGQ9BPX3 1015 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 RDH14Q9HBH5 336 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 NEU3Q9UQ49 428 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 NBASA2RRP1 2371 aa20.28■□□□□ 0.84
TARDBP-228ENST00000629725 INSIG1O15503 277 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 LRIG2O94898 1065 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 PIGNO95427 931 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 CPNE6O95741 557 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 CCL4P13236 92 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 CYP11B1P15538 503 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 LIG3P49916 1009 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 POLE2P56282 527 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 SKIDA1Q1XH10 827 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 RAB6CQ53S08 254 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 INO80DQ53TQ3 878 aaPredicted RBP20.27■□□□□ 0.84
TARDBP-228ENST00000629725 ERAP2Q6P179 960 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 EMC1Q8N766 993 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 OR56A4Q8NGH8 313 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 OR1E3Q8WZA6 343 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 RAB6CQ9H0N0 254 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 PCDH12Q9NPG4 1184 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 MRPL40Q9NQ50 206 aaKnown RBP20.27■□□□□ 0.84
TARDBP-228ENST00000629725 TUBD1Q9UJT1 453 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 DAAM1Q9Y4D1 1078 aa20.27■□□□□ 0.84
TARDBP-228ENST00000629725 TMEM202A6NGA9 273 aa20.26■□□□□ 0.83
TARDBP-228ENST00000629725 CACNB4O00305 520 aaPredicted RBP20.26■□□□□ 0.83
TARDBP-228ENST00000629725 B4GALNT1Q00973 533 aa20.26■□□□□ 0.83
TARDBP-228ENST00000629725 C15orf59Q2T9L4 293 aaPredicted RBP20.26■□□□□ 0.83
TARDBP-228ENST00000629725 TAF3Q5VWG9 929 aa20.26■□□□□ 0.83
TARDBP-228ENST00000629725 SPECC1LQ69YQ0 1117 aa20.26■□□□□ 0.83
TARDBP-228ENST00000629725 IL22RA1Q8N6P7 574 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms