RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 ADARB1P78563 741 aaKnown RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 BNIP3Q12983 259 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SLC12A1Q13621 1099 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ITGA7Q13683 1181 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TARBP2Q15633 366 aaKnown RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CA9Q16790 459 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ANO4Q32M45 955 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 FGD3Q5JSP0 725 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 RBM48Q5RL73 367 aaKnown RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 C6orf10Q5SRN2 563 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TREML2Q5T2D2 321 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SH3PXD2AQ5TCZ1 1133 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 NCBP2-AS2Q69YL0 99 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CASC4Q6P4E1 433 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ZNF773Q6PK81 442 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SLC2A7Q6PXP3 512 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 BLOC1S3Q6QNY0 202 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 XKR5Q6UX68 686 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 GK5Q6ZS86 529 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TMEM26Q6ZUK4 368 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 USP50Q70EL3 339 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 STRA8Q7Z7C7 330 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CMC1Q7Z7K0 106 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 IGFN1Q86VF2 1251 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CCDC60Q8IWA6 550 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TNS4Q8IZW8 715 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 RNF148Q8N7C7 305 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SHCBP1Q8NEM2 672 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TRPV3Q8NET8 790 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 HMGCLL1Q8TB92 370 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SPPL2BQ8TCT7 592 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CHAC2Q8WUX2 184 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CANT1Q8WVQ1 401 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SH3YL1Q96HL8 342 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 FCRL3Q96P31 734 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ALPK1Q96QP1 1244 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CYP2S1Q96SQ9 504 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 C11orf84Q9BUA3 381 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ELOVL4Q9GZR5 314 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 PCDHAC1Q9H158 963 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 GBA3Q9H227 469 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 POLR1BQ9H9Y6 1135 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 MEAF6Q9HAF1 191 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ATP13A2Q9NQ11 1180 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CASS4Q9NQ75 786 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ANLNQ9NQW6 1124 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 AGPAT4Q9NRZ5 378 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TBC1D13Q9NVG8 400 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TRNAU1APQ9NX07 287 aaKnown RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 DTLQ9NZJ0 730 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 GMIPQ9P107 970 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ANKMY1Q9P2S6 941 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ZNF639Q9UID6 485 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ERVK-11Q9UQG0 969 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 NDUFAF1Q9Y375 327 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 TSC22D4Q9Y3Q8 395 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 MTF2Q9Y483 593 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SNX9Q9Y5X1 595 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 CSADQ9Y600 493 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 PTPRDP23468 1912 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SCN1AP35498 2009 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 SCN10AQ9Y5Y9 1956 aa4.2□□□□□ -1.74
PTP4A1-205ENST00000626021 ZCWPW2A0A1B0GU75 182 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 TTC24A2A3L6 582 aaPredicted RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 ADM5C9JUS6 153 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 M0QYV0 167 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 MRASO14807 208 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 SLC22A1O15245 554 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 PSMD3O43242 534 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 GAS2O43903 313 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 MAFO75444 373 aaPredicted RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 JRKO75564 520 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 TIPRLO75663 272 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 CSPG5O95196 566 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 SLC25A27O95847 323 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 ERVK-10P10266 1014 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 CYP2C8P10632 490 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 CD247P20963 164 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 TGM1P22735 817 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 GSTM2P28161 218 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 LEPRP48357 1165 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 ARCN1P48444 511 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 GSSP48637 474 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 NEK2P51955 445 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 KPNA2P52292 529 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 SESN2P58004 480 aaPredicted RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 GBE1Q04446 702 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 FOXM1Q08050 763 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 INCA1Q0VD86 236 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 CDC20Q12834 499 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 TRAF2Q12933 501 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 ITGADQ13349 1161 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 FASTKQ14296 549 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 CYP2A13Q16696 494 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 PHKG1Q16816 387 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 TRIM16LQ309B1 348 aa4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 PPP6R3Q5H9R7 873 aaPredicted RBP4.19□□□□□ -1.74
PTP4A1-205ENST00000626021 COQ5Q5HYK3 327 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms