RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 NEK5Q6P3R8 708 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ALKBH5Q6P6C2 394 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 FBXL19Q6PCT2 694 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 LEKR1Q6ZMV7 388 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 DPY19L3Q6ZPD9 716 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ERN2Q76MJ5 926 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 VN1R5Q7Z5H4 357 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 NLRP14Q86W24 1093 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 DNAAF5Q86Y56 855 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PSTKQ8IV42 348 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 RNF214Q8ND24 703 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 OR8K1Q8NGG5 319 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 OR2I1PQ8NGU4 316 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 FNIP1Q8TF40 1166 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 SETD7Q8WTS6 366 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 CASKIN2Q8WXE0 1202 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ISG20Q96AZ6 181 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 LRIG1Q96JA1 1093 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ANP32EQ9BTT0 268 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 MAGEB5Q9BZ81 275 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ZDHHC6Q9H6R6 413 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ZWILCHQ9H900 591 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PREBQ9HCU5 417 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 TM7SF3Q9NS93 570 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 GPATCH2LQ9NWQ4 482 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ZNF212Q9UDV6 495 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 IP6K2Q9UHH9 426 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 DMTF1Q9Y222 760 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 SNX11Q9Y5W9 270 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ABCA7Q8IZY2 2146 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PLXND1Q9Y4D7 1925 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 MUC22E2RYF6 1773 aaPredicted RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 SPAG17Q6Q759 2223 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 WASH4PA8MWX3 477 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 UPK3BL1B0FP48 263 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 RASA4BC9J798 803 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 UPK3BL2E5RIL1 263 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 MYO1FO00160 1098 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 NEMP1O14524 444 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 VILLO15195 856 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 RASA4O43374 803 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 AKR1B10O60218 316 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 RNGTTO60942 597 aaKnown RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 POP4O95707 220 aaKnown RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 DLGAP3O95886 979 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 IGSF6O95976 241 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 GYPCP04921 128 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 CTSLP07711 333 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 ZNF883P0CG24 379 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SPINK2P20155 84 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 XPAP23025 273 aaPredicted RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 MIPP30301 263 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 MAT2AP31153 395 aaKnown RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 AKT2P31751 481 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 DRD3P35462 400 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 PCK1P35558 622 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 HCAR3P49019 387 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 CCNHP51946 323 aaPredicted RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 NEK3P51956 506 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 NDST2P52849 883 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 METAP1P53582 386 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 RHOAP61586 193 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SIM1P81133 766 aaPredicted RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 ZNF252P-AS1Q0IIN9 211 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SGCGQ13326 291 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SERINC3Q13530 473 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 HADHQ16836 314 aaKnown RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 KIF19Q2TAC6 998 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 MYLK3Q32MK0 819 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 INAVAQ3KP66 663 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 INO80DQ53TQ3 878 aaPredicted RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 CFAP58Q5T655 872 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 AGBL4Q5VU57 503 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 NAPEPLDQ6IQ20 393 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 RFX8Q6ZV50 586 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 TRIM69Q86WT6 500 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 NAXDQ8IW45 347 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 UMODL1-AS1Q8N2C9 162 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 LZTR1Q8N653 840 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 PAF1Q8N7H5 531 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 CHST14Q8NCH0 376 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 OR2AP1Q8NGE2 309 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 CTNNBL1Q8WYA6 563 aaPredicted RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 HSPH1Q92598 858 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 HMCESQ96FZ2 354 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 FEM1CQ96JP0 617 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SLC6A18Q96N87 628 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SNRNP25Q9BV90 132 aaKnown RBP6.49□□□□□ -1.37
TCF4-249ENST00000625716 NUP85Q9BW27 656 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 OSBPL1AQ9BXW6 950 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 HDAC8Q9BY41 377 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 TM6SF2Q9BZW4 377 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 THAP2Q9H0W7 228 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 GDF3Q9NR23 364 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 CTTNBP2NLQ9P2B4 639 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 LCMT1Q9UIC8 334 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 ANAPC7Q9UJX3 599 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 ANGPTL2Q9UKU9 493 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 OAS3Q9Y6K5 1087 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms