RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ATP5OP48047 213 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 NR2C2P49116 596 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 EPHB1P54762 984 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 C21orf59P57076 290 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 MAXP61244 160 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 LMNB2Q03252 620 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF211Q13398 564 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 UBAP2LQ14157 1087 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SF3A2Q15428 464 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CYTH1Q15438 398 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CSRP2Q16527 193 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 DUOXA1Q1HG43 343 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SETMARQ53H47 684 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC45A4Q5BKX6 768 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 TRIM61Q5EBN2 209 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 LRRC73Q5JTD7 316 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 AGBL4Q5VU57 503 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC9A4Q6AI14 798 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ERAP2Q6P179 960 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 NPNTQ6UXI9 565 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PRR23CQ6ZRP0 262 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PARS2Q7L3T8 475 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 TTC7BQ86TV6 843 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 NT5DC3Q86UY8 548 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ZC3H18Q86VM9 953 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC41A1Q8IVJ1 513 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PQLC3Q8N755 202 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 BEND7Q8N7W2 519 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CEP76Q8TAP6 659 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 TFB1MQ8WVM0 346 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 RAB7BQ96AH8 199 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ARRDC3Q96B67 414 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SKA1Q96BD8 255 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 BIRC7Q96CA5 298 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 FAF2Q96CS3 445 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 HDAC11Q96DB2 347 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SERAC1Q96JX3 654 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PSKH2Q96QS6 385 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 MYOCQ99972 504 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 EDEM2Q9BV94 578 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 GTPBP2Q9BX10 602 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 POLR1EQ9GZS1 481 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 SMOC1Q9H4F8 434 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PREBQ9HCU5 417 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 RBM22Q9NW64 420 aaKnown RBP eCLIP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 DTLQ9NZJ0 730 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 TPX2Q9ULW0 747 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PPP2R2CQ9Y2T4 447 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PCDHA3Q9Y5H8 950 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 BDP1A6H8Y1 2624 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CHD5Q8TDI0 1954 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 VCANP13611 3396 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 RALGAPA1Q6GYQ0 2036 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 A0A1B0GTW7 788 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 A0A1W2PQU0 124 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 C3orf70A6NLC5 250 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 C16orf96A6NNT2 1141 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 UPK3BL1B0FP48 263 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PATE3B3GLJ2 98 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 UPK3BL2E5RIL1 263 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 MATN3O15232 486 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 INSIG1O15503 277 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 MTSS1O43312 755 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 OIP5O43482 229 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF821O75541 412 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CPP00450 1065 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 SYPP08247 313 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF806P0C7X5 589 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PRLRP16471 622 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CD27P26842 260 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 AKT2P31751 481 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CCR5P51681 352 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 POLR2LP62875 67 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 FAM193AP78312 1265 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PPIDQ08752 370 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 ELP6Q0PNE2 266 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CCDC173Q0VFZ6 552 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 SGCGQ13326 291 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 HNRNPDQ14103 355 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 RPS6KA1Q15418 735 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PPP2R5EQ16537 467 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PIP5KL1Q5T9C9 394 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 TCEAL6Q6IPX3 200 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 BRAT1Q6PJG6 821 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CAMK1DQ8IU85 385 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CDKL3Q8IVW4 592 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 NDUFAF2Q8N183 169 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PLD5Q8N7P1 536 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 LRRC57Q8N9N7 239 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 TRIM58Q8NG06 486 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CXorf40AQ8TE69 158 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 RHBDD1Q8TEB9 315 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 KLK6Q92876 244 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 TCEAL3Q969E4 200 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF419Q96HQ0 510 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 FEM1CQ96JP0 617 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF641Q96N77 438 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 AGAP3Q96P47 875 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms