RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 HCRTO43612 131 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 C7P10643 843 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 STMN1P16949 149 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 ATP5F1P24539 256 aaPredicted RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 PSMA4P25789 261 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 YWHAQP27348 245 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 ADORA2BP29275 332 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 OXTRP30559 389 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 POLR2IP36954 125 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 MATKP42679 507 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 CD151P48509 253 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 HMGCS2P54868 508 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 RPS3AP61247 264 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 ATP6V0D1P61421 351 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 PRPSAP1Q14558 356 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 DENND6AQ8IWF6 608 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 ANKRD13AQ8IZ07 590 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 AFAP1L2Q8N4X5 818 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 DHRSXQ8N5I4 330 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 HEXDCQ8WVB3 486 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 NDRG1Q92597 394 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 FEM1CQ96JP0 617 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 C1orf50Q9BV19 199 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 IL1RL2Q9HB29 575 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 CYP4F12Q9HCS2 524 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 C1orf232A0A0U1RR37 186 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 CPNE6O95741 557 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 BCL10O95999 233 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 MT-CO1P00395 513 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 ZNF24P17028 368 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 NFKB1P19838 968 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 HLCSP50747 726 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 TMBIM6P55061 237 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 BST2Q10589 180 aaKnown RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 CTBP1Q13363 440 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 SLC25A52Q3SY17 297 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 CYBRD1Q53TN4 286 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 TMTC4Q5T4D3 741 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 OTUD1Q5VV17 481 aaPredicted RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 EFCAB12Q6NXP0 572 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 METTL7BQ6UX53 244 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 CUZD1Q86UP6 607 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 IGFN1Q86VF2 1251 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 FUNDC1Q8IVP5 155 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 EXOC8Q8IYI6 725 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 MYRFLQ96LU7 910 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 RHOBTB2Q9BYZ6 727 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 SOX17Q9H6I2 414 aaPredicted RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 TBC1D13Q9NVG8 400 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 PRMT7Q9NVM4 692 aaPredicted RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 SMPD3Q9NY59 655 aaPredicted RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 SCN1AP35498 2009 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 PPEF2O14830 753 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 KCNA5P22460 613 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 MLLT10P55197 1068 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 ZNF280AP59817 542 aaPredicted RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 ADGRG5Q8IZF4 528 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 PCYOX1LQ8NBM8 494 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 HDAC10Q969S8 669 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 PPP1R16BQ96T49 567 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 KIFC1Q9BW19 673 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 NANOGQ9H9S0 305 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 EML4Q9HC35 981 aaKnown RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 FBRSL1Q9HCM7 1045 aaKnown RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 PKD2L2Q9NZM6 624 aa14.19□□□□□ -0.14
LDB3-209ENST00000623056 IFT80Q9P2H3 777 aaPredicted RBP14.19□□□□□ -0.14
LDB3-209ENST00000623056 KRBA1A5PL33 1030 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 CLPXO76031 633 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 GSTT2P0CG29 244 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 GSTT2BP0CG30 244 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 JAK1P23458 1154 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 PLCL1Q15111 1095 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 AMHR2Q16671 573 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 UGP2Q16851 508 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 TRIM16LQ309B1 348 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 ZNF362Q5T0B9 420 aaPredicted RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 ARHGAP17Q68EM7 881 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 LCN8Q6JVE9 175 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 SPNS2Q8IVW8 549 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 DDIASQ8IXT1 998 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 OR6B3Q8NGW1 331 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 TAMM41Q96BW9 452 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 DCPSQ96C86 337 aaKnown RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 YTHDF1Q9BYJ9 559 aaKnown RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 FANCEQ9HB96 536 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 MAP10Q9P2G4 905 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 ABCD2Q9UBJ2 740 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 HACL1Q9UJ83 578 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 ATP6AP2A0A1C7CYW4 349 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 RBM47A0AV96 593 aaKnown RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 ATP6AP2O75787 350 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 ERCC2P18074 760 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 GNL1P36915 607 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms