RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TTYH1Q9H313 450 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-229ENST00000621897 PEMTQ9UBM1 199 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 SLCO3A1Q9UIG8 710 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 WNT9BO14905 357 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 ZIC3O60481 467 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 TSPAN3O60637 253 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 KRT36O76013 467 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CLDN14O95500 239 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 PLGP00747 810 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-229ENST00000621897 UMODP07911 640 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 SLC2A4P14672 509 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 PTPN2P17706 415 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CCR5P51681 352 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 NR1H2P55055 460 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 YWHAZP63104 245 aaKnown RBP4.46□□□□□ -1.7
BRCA1-229ENST00000621897 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CALCRLQ16602 461 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 PLD5Q8N7P1 536 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CREB3L4Q8TEY5 395 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 SORCS1Q8WY21 1168 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 INPP4AQ96PE3 977 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-229ENST00000621897 DDX4Q9NQI0 724 aaKnown RBP4.46□□□□□ -1.7
BRCA1-229ENST00000621897 SNTG1Q9NSN8 517 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CISD1Q9NZ45 108 aaKnown RBP4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CDC14AQ9UNH5 594 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 SNX9Q9Y5X1 595 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 KIF26BQ2KJY2 2108 aa4.46□□□□□ -1.7
BRCA1-229ENST00000621897 CLGNO14967 610 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 EFNA5P52803 228 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-229ENST00000621897 ATG16L1Q676U5 607 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 MEX3BQ6ZN04 569 aaKnown RBP4.45□□□□□ -1.7
BRCA1-229ENST00000621897 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 ZNF441Q8N8Z8 693 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 POC1AQ8NBT0 407 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 NEK9Q8TD19 979 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 MORC4Q8TE76 937 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 HERVK_113Q902F9 699 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 MTBPQ96DY7 904 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 ZC3HAV1LQ96H79 300 aaKnown RBP4.45□□□□□ -1.7
BRCA1-229ENST00000621897 OR1F2PQ96R84 312 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 NODALQ96S42 347 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 MXRA8Q9BRK3 442 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 SDF2L1Q9HCN8 221 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 HSF4Q9ULV5 492 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 NFE2L3Q9Y4A8 694 aa4.45□□□□□ -1.7
BRCA1-229ENST00000621897 HMGB1P1B2RPK0 211 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-229ENST00000621897 IFNL4K9M1U5 179 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 BMPR1BO00238 502 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 LINC01565O15544 149 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 NDUFS7O75251 213 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 LINC00271P0C7V0 271 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 HNRNPH1P31943 449 aaKnown RBP4.44□□□□□ -1.7
BRCA1-229ENST00000621897 SERTAD4-AS1Q5TG53 156 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 B3GNT6Q6ZMB0 384 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-229ENST00000621897 GPAT4Q86UL3 456 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 SMC5Q8IY18 1101 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 NAGSQ8N159 534 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 ZBTB8BQ8NAP8 495 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-229ENST00000621897 SPATA22Q8NHS9 363 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 C3orf30Q96M34 536 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 ZNF385AQ96PM9 386 aaKnown RBP4.44□□□□□ -1.7
BRCA1-229ENST00000621897 LBHD1Q9BQE6 289 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-229ENST00000621897 HEMGNQ9BXL5 484 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 PPCSQ9HAB8 311 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 RIC8AQ9NPQ8 531 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 TCF7L2Q9NQB0 619 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 BABAM1Q9NWV8 329 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 KIAA1456Q9P272 454 aa4.44□□□□□ -1.7
BRCA1-229ENST00000621897 TAF1P21675 1872 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 A0A0B4J293 547 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 HNRNPCL2B2RXH8 293 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 SOCS6O14544 535 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 XPNPEP2O43895 674 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GAGE7O76087 117 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 NDUFB4O95168 129 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 URODP06132 367 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GAGE12FP0CL80 117 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GAGE12GP0CL81 117 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GAGE12IP0CL82 117 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 PCNAP12004 261 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 EFNB1P98172 346 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 UBE3AQ05086 875 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 ARL16Q0P5N6 197 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 ZNF155Q12901 538 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GRIK3Q13003 919 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GAGE1Q13065 139 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 GAGE4Q13068 117 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 PPFIA1Q13136 1202 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 OASLQ15646 514 aaKnown RBP4.43□□□□□ -1.7
BRCA1-229ENST00000621897 MMEL1Q495T6 779 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 SECTM1Q8WVN6 248 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 ZSCAN31Q96LW9 406 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-229ENST00000621897 HERPUD2Q9BSE4 406 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 MMTAG2Q9BU76 263 aaKnown RBP4.43□□□□□ -1.7
BRCA1-229ENST00000621897 UBA5Q9GZZ9 404 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 LRRC4Q9HBW1 653 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 SMYD2Q9NRG4 433 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms