RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZNF789Q5FWF6 425 aa10□□□□□ -0.81
VTA1-205ENST00000620996 RNF43Q68DV7 783 aa10□□□□□ -0.81
VTA1-205ENST00000620996 KIAA0930Q6ICG6 404 aaPredicted RBP10□□□□□ -0.81
VTA1-205ENST00000620996 RBM23Q86U06 439 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 PTCD2Q8WV60 388 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 POF1BQ8WVV4 589 aa10□□□□□ -0.81
VTA1-205ENST00000620996 C10orf82Q8WW14 230 aa10□□□□□ -0.81
VTA1-205ENST00000620996 SREK1Q8WXA9 508 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 PDFQ9HBH1 243 aa10□□□□□ -0.81
VTA1-205ENST00000620996 NMRAL1Q9HBL8 299 aa10□□□□□ -0.81
VTA1-205ENST00000620996 SLC40A1Q9NP59 571 aa10□□□□□ -0.81
VTA1-205ENST00000620996 BAIAP2L1Q9UHR4 511 aa10□□□□□ -0.81
VTA1-205ENST00000620996 TRIM33Q9UPN9 1127 aa10□□□□□ -0.81
VTA1-205ENST00000620996 STK38LQ9Y2H1 464 aa10□□□□□ -0.81
VTA1-205ENST00000620996 A0A0U1RQS6 177 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 RALBP11234 206 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ABL2P42684 1182 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ARCN1P48444 511 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 RBM20Q5T481 1227 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 GPR158Q5T848 1215 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CXorf57Q6NSI4 855 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 CHST9Q7L1S5 443 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 SETD3Q86TU7 594 aaPredicted RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 WFDC5Q8TCV5 224 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 MOCOSQ96EN8 888 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ZNF599Q96NL3 588 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 C17orf80Q9BSJ5 609 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 MKS1Q9NXB0 559 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 UBA6A0AVT1 1052 aaPredicted RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 TK2O00142 265 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 LUC7L3O95232 432 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 PROCP04070 461 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 FGF1P05230 155 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ATXN1LP0C7T5 689 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 MYOGP15173 224 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 HLA-DPA1P20036 260 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 TPP2P29144 1249 aaPredicted RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 SLC1A6P48664 564 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 AQP5P55064 265 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 PCLAFQ15004 111 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 GLT6D1Q7Z4J2 308 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CALML6Q8TD86 181 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 FEM1CQ96JP0 617 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 RAD9AQ99638 391 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 GPR22Q99680 433 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 SHCBP1LQ9BZQ2 653 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 BPIFA1Q9NP55 256 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 TREX1Q9NSU2 369 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 COPG2Q9UBF2 871 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 DNAJC16Q9Y2G8 782 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ACOT9Q9Y305 439 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 RAI2Q9Y5P3 530 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CARNS1A5YM72 827 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 K7ERQ8 282 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 NRG2O14511 850 aaPredicted RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 PER2O15055 1255 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ITM2AO43736 263 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 HSPA4LO95757 839 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 PDHA1P08559 390 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 HSPA1AP0DMV8 641 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 HSPA1BP0DMV9 641 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 SERPINB3P29508 390 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 SLC8A1P32418 973 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ARF5P84085 180 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 SLC12A1Q13621 1099 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CSHL1Q14406 222 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 PTPRRQ15256 657 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CYTH1Q15438 398 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CES4AQ5XG92 561 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 CEP97Q8IW35 865 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 GBP7Q8N8V2 638 aaPredicted RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 OR13J1Q8NGT2 312 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 EZH1Q92800 747 aaPredicted RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 EXT2Q93063 718 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 KLHL29Q96CT2 875 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 TCEAL4Q96EI5 215 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 PSKH2Q96QS6 385 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 NUDCD1Q96RS6 583 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 TACO1Q9BSH4 297 aaKnown RBP9.99□□□□□ -0.81
VTA1-205ENST00000620996 CERS4Q9HA82 394 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 SIRPGQ9P1W8 387 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 ASB3Q9Y575 518 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
VTA1-205ENST00000620996 BIRC5O15392 142 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 NDST3O95803 873 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 GLP2RO95838 553 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 MT-CO1P00395 513 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 GOT2P00505 430 aaKnown RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 PRSS56P0CW18 603 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 CTPS1P17812 591 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 TAS2R39P59534 338 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 RAB10P61026 200 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 CCDC153Q494R4 210 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 CFAP157Q5JU67 520 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 TMEM240Q5SV17 173 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 APCDD1Q8J025 514 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 CCNYL1Q8N7R7 359 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms