RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 XRCC1P18887 633 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 TFE3P19532 575 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 GRIK1P39086 918 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 TKTL1P51854 596 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PRKAA2P54646 552 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 SEMA5AQ13591 1074 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 RPS6KA2Q15349 733 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CCDC85BQ15834 202 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM110Q86TL2 294 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CLVS1Q8IUQ0 354 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM126BQ8IUX1 230 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF786Q8N393 782 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CLEC4CQ8WTT0 213 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 MYLPFQ96A32 169 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PPP1R14BQ96C90 147 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 OSBPL11Q9BXB4 747 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 COMMD10Q9Y6G5 202 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 THSD7BQ9C0I4 1608 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 HEATR9A2RTY3 570 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM38O00635 465 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 GABRDO14764 452 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 MDM4O15151 490 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 SRP72O76094 671 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CSPG5O95196 566 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM163BP0C2L3 166 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 FGFR3P22607 806 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ABCG1P45844 678 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CDKN1CP49918 316 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 NAGLUP54802 743 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PHEXP78562 749 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 NFKB2Q00653 900 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PLOD1Q02809 727 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 MYLK3Q32MK0 819 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 DCAF6Q58WW2 860 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 KIAA0319Q5VV43 1072 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 NECAB2Q7Z6G3 386 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM35AQ86V20 835 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ZFP28Q8NHY6 868 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 RIN3Q8TB24 985 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 QKIQ96PU8 341 aaKnown RBP eCLIP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 DCUN1D5Q9BTE7 237 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ACE2Q9BYF1 805 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 C11orf49Q9H6J7 331 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PLGRKTQ9HBL7 147 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PNPLA3Q9NST1 481 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 SYBUQ9NX95 663 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 NSMCE4AQ9NXX6 385 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ABI2Q9NYB9 513 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 VANGL2Q9ULK5 521 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 AURKCQ9UQB9 309 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 H3BNX3 289 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 NRP1O14786 923 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 SUPT3HO75486 399 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF189O75820 626 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 BEST1O76090 585 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 VAPBO95292 243 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CLTBP09497 229 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PSMB4P28070 264 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 GRIA2P42262 883 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 GRIA4P48058 902 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ALDH7A1P49419 539 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 HARS2P49590 506 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 NDUFV1P49821 464 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 HK2P52789 917 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 DPYSQ14117 519 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 UGP2Q16851 508 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC9A4Q6AI14 798 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ITPRIPL1Q6GPH6 555 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 EPGNQ6UW88 154 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM131BQ86XD5 332 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 RBM12BQ8IXT5 1001 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 CELF2-AS1Q8N7Q2 184 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 RTP4Q96DX8 246 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 MARK4Q96L34 752 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PGLYRP2Q96PD5 576 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 FERD3LQ96RJ6 166 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 LGMNQ99538 433 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ACBD6Q9BR61 282 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 RHOBTB2Q9BYZ6 727 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF696Q9H7X3 374 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 PRDM9Q9NQV7 894 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ANK1P16157 1881 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 A0A087WXM4 84 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CCDC78A2IDD5 438 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 B4GALT3O60512 393 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ATP6V1G1O75348 118 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 TFAP2AP05549 437 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 COL6A1P12109 1028 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CPB1P15086 417 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 IL10P22301 178 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 EEF1B2P24534 225 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 SULT1E1P49888 294 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CLCN2P51788 898 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms