RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 NSUN2Q08J23 767 aaKnown RBP eCLIP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CBLBQ13191 982 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 MSLNQ13421 630 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 GALNT3Q14435 633 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 PRPSAP1Q14558 356 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 BRD3Q15059 726 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 UAP1Q16222 522 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 LPAL2Q16609 132 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 MYLK3Q32MK0 819 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 HNRNPA1L2Q32P51 320 aaKnown RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 BBS9Q3SYG4 887 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 C2orf27AQ580R0 203 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CARD16Q5EG05 197 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 HP1BP3Q5SSJ5 553 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 BEND6Q5SZJ8 279 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CERCAMQ5T4B2 595 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 C9orf64Q5T6V5 341 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 LRRC8BQ6P9F7 803 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 RANBP10Q6VN20 620 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 PRR23BQ6ZRT6 265 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 TMC3Q7Z5M5 1100 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CCDC25Q86WR0 208 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CAMK1DQ8IU85 385 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SLC25A41Q8N5S1 370 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 FAM160A2Q8N612 972 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 GRIN3AQ8TCU5 1115 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 ANKRD7Q92527 254 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 RMDN1Q96DB5 314 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 FEM1CQ96JP0 617 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SIGLEC10Q96LC7 697 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 FAM129AQ9BZQ8 928 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 ZDHHC6Q9H6R6 413 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SAYSD1Q9NPB0 183 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 VPS45Q9NRW7 570 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SYBUQ9NX95 663 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 DLL3Q9NYJ7 618 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 NINJ2Q9NZG7 142 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 HECAQ9UBI9 543 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 EBF1Q9UH73 591 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CHKBQ9Y259 395 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 RAI2Q9Y5P3 530 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 STON1Q9Y6Q2 735 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 OTOGLQ3ZCN5 2332 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 ZNF292O60281 2723 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 A0A0U1RQS6 177 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CCDC151A5D8V7 595 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ERI2A8K979 691 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SMAPO00193 183 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 AXIN1O15169 862 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PSMD3O43242 534 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 HTRA2O43464 458 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 TIMM44O43615 452 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ADAM23O75077 832 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 RPP40O75818 363 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PGLSO95336 258 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 KLF8O95600 359 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 APBB3O95704 486 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 NDST3O95803 873 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 UGT2B4P06133 528 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 MLNP12872 115 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ARL4CP56559 192 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SESN2P58004 480 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 GPX6P59796 221 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ST8SIA6P61647 398 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CDK16Q00536 496 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CDK18Q07002 472 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SPEM2Q0P670 501 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SLC1A5Q15758 541 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 HIF1AQ16665 826 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 QPCTQ16769 361 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 HSF5Q4G112 596 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 RALGPS1Q5JS13 557 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SIRPB2Q5JXA9 342 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 NAPEPLDQ6IQ20 393 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 KIAA1211LQ6NV74 962 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SERPINA13PQ6UXR4 307 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PPP1R21Q6ZMI0 780 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CEP68Q76N32 757 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ERMP1Q7Z2K6 904 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 METTL3Q86U44 580 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 RASSF3Q86WH2 238 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ANKMY2Q8IV38 441 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 RYBPQ8N488 228 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ZNF513Q8N8E2 541 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 IL17RCQ8NAC3 791 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 KDM1BQ8NB78 822 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 LPCAT1Q8NF37 534 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 KCNV2Q8TDN2 545 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 UCMAQ8WVF2 138 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PIH1D2Q8WWB5 315 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CAVIN3Q969G5 261 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ARRDC3Q96B67 414 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ECHDC3Q96DC8 303 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms