RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CPA2P48052 419 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ARFIP2P53365 341 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ZNF33AQ06730 810 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 USP4Q13107 963 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CAMK1Q14012 370 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SEMA3AQ14563 771 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TAF1BQ53T94 588 aaPredicted RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 FYB2Q5VWT5 728 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TRIM68Q6AZZ1 485 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 LILRA6Q6PI73 481 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 POTEHQ6S545 545 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 NLRP9Q7RTR0 991 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 GLT6D1Q7Z4J2 308 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TMC8Q8IU68 726 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TEX26Q8N6G2 289 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CCNYL1Q8N7R7 359 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 MDGA1Q8NFP4 955 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SHKBP1Q8TBC3 707 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TRMT2BQ96GJ1 504 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 ZFYVE19Q96K21 471 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 LRRC37BQ96QE4 947 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 GCNAQ96QF7 691 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 OLFM1Q99784 485 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 EBF4Q9BQW3 602 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TMEM120AQ9BXJ8 343 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 EMILIN2Q9BXX0 1053 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TRIM55Q9BYV6 548 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ECT2Q9H8V3 914 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PIDD1Q9HB75 910 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PDFQ9HBH1 243 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SARS2Q9NP81 518 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.46□□□□□ -1.86
LIG4-205ENST00000614526 ABCB8Q9NUT2 735 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 COMMD8Q9NX08 183 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 DNMT3BQ9UBC3 853 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 SLCO3A1Q9UIG8 710 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 HAO1Q9UJM8 370 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 LSM7Q9UK45 103 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 FAM50BQ9Y247 325 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 DNAJC16Q9Y2G8 782 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 WNT6Q9Y6F9 365 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TRAV19A0A0A6YYK7 116 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ILVBLA1L0T0 632 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ANTXRLA6NF34 631 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SRRM3A6NNA2 597 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 GREM1O60565 184 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GLRA3O75311 464 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 LUC7L3O95232 432 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 GSRP00390 522 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PRLP01236 227 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CHRNGP07510 517 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 RHOP08100 348 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 RALBP11234 206 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 STMN1P16949 149 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CCNFP41002 786 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CD151P48509 253 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SERPINB8P50452 374 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 NAGLUP54802 743 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ALDH18A1P54886 795 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 AQP5P55064 265 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 KCNJ2P63252 427 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HTRA4P83105 476 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 LMAN2Q12907 356 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TRAF2Q12933 501 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 DLG1Q12959 904 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PCLAFQ15004 111 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 KLHDC10Q6PID8 442 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 NAPRTQ6XQN6 538 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CYS1Q717R9 158 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ADGRD2Q7Z7M1 963 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CCDC117Q8IWD4 279 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 FSTL5Q8N475 847 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 OVCA2Q8WZ82 227 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PHF21BQ96EK2 531 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PSKH2Q96QS6 385 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 BBS2Q9BXC9 721 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 LRRC3Q9BY71 257 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 RHOJQ9H4E5 214 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 NMRAL1Q9HBL8 299 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SSU72Q9NP77 194 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 VPS45Q9NRW7 570 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TREX1Q9NSU2 369 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 FNIP2Q9P278 1114 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PRKAG3Q9UGI9 489 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 DCDC2Q9UHG0 476 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 STARD13Q9Y3M8 1113 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GOLGA8QA0A0J9YX86 632 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 LOC285095A0A1B0GVY8 99 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GOLGA8OA6NCC3 632 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 IQCF5A8MTL0 148 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GOLGA8NF8WBI6 632 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 NEMP1O14524 444 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TIMM44O43615 452 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 OR1I1O60431 355 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PROCP04070 461 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SLC35E2BP0CK96 405 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CCDC166P0CW27 439 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ITGB6P18564 788 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CNTFP26441 200 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 FMO4P31512 558 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms