RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LRRC73Q5JTD7 316 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 DRICH1Q6PGQ1 229 aaPredicted RBP13.35□□□□□ -0.27
MDC1-209ENST00000613547 CCDC89Q8N998 374 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 COG1Q8WTW3 980 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 DNASE2BQ8WZ79 361 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 PIGKQ92643 395 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 RMDN1Q96DB5 314 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 GBA3Q9H227 469 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 USP29Q9HBJ7 922 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 GOLGA6AQ9NYA3 693 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 FAM153AQ9UHL3 310 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 EIF2B4Q9UI10 523 aaKnown RBP13.35□□□□□ -0.27
MDC1-209ENST00000613547 DMTF1Q9Y222 760 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 AAR2Q9Y312 384 aaKnown RBP13.35□□□□□ -0.27
MDC1-209ENST00000613547 A0A1W2PPC4 97 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
MDC1-209ENST00000613547 LATO43561 262 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 FZD6O60353 706 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 PMPCBO75439 489 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 GCATO75600 419 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 IFNB1P01574 187 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 ITGAVP06756 1048 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 MMP2P08253 660 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 MAT2AP31153 395 aaKnown RBP13.34□□□□□ -0.27
MDC1-209ENST00000613547 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
MDC1-209ENST00000613547 MMP12P39900 470 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 MPLP40238 635 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 GRIA4P48058 902 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 GEMP55040 296 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 PPP2CBP62714 309 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 PPP2CAP67775 309 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 LMNB2Q03252 620 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 CDK18Q07002 472 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 MPP3Q13368 585 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 SIX1Q15475 284 aaPredicted RBP13.34□□□□□ -0.27
MDC1-209ENST00000613547 OASLQ15646 514 aaKnown RBP13.34□□□□□ -0.27
MDC1-209ENST00000613547 PCSK7Q16549 785 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 TMEM52BQ4KMG9 183 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 GSTA5Q7RTV2 222 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 LPCAT1Q8NF37 534 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 CEP76Q8TAP6 659 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 RTP4Q96DX8 246 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 FAM122AQ96E09 287 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 SCRN2Q96FV2 425 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 MS4A14Q96JA4 679 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 ARRDC1-AS1Q9H2J1 176 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 CHKBQ9Y259 395 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 ITM2BQ9Y287 266 aa13.34□□□□□ -0.27
MDC1-209ENST00000613547 DRG1Q9Y295 367 aaKnown RBP13.34□□□□□ -0.27
MDC1-209ENST00000613547 F5H423 210 aaPredicted RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 FOXD2O60548 495 aaPredicted RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 LRP3O75074 770 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 MT-CYBP00156 380 aaPredicted RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 AKT2P31751 481 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 VIPR1P32241 457 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 PAFAH1B1P43034 410 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 ARHGEF7Q14155 803 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 TEAD4Q15561 434 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 PARP6Q2NL67 630 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 DPPA4Q7L190 304 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 PIH1D2Q8WWB5 315 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 ASB12Q8WXK4 309 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 SKA1Q96BD8 255 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 TADA1Q96BN2 335 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 SRPK1Q96SB4 655 aaKnown RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 PHOX2BQ99453 314 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 WRAP53Q9BUR4 548 aaKnown RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 AASDHPPTQ9NRN7 309 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 UBP1Q9NZI7 540 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 RNF14Q9UBS8 474 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 FEZ2Q9UHY8 353 aaPredicted RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 GGT7Q9UJ14 662 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 PILRBQ9UKJ0 227 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 PPIL1Q9Y3C6 166 aa13.33□□□□□ -0.28
MDC1-209ENST00000613547 ZFHX2Q9C0A1 2572 aaPredicted RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 ATXN2Q99700 1313 aaKnown RBP13.33□□□□□ -0.28
MDC1-209ENST00000613547 GPR179Q6PRD1 2367 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 A0A1B0GTW7 788 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 ANKRD66B4E2M5 251 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 PRAMEF26H0Y7S4 382 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 KIF2AO00139 706 aaPredicted RBP13.32□□□□□ -0.28
MDC1-209ENST00000613547 ZNF185O15231 689 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 BCAT2O15382 392 aaPredicted RBP13.32□□□□□ -0.28
MDC1-209ENST00000613547 PSMD3O43242 534 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 SPINT1O43278 529 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 LZTS3O60299 673 aaPredicted RBP13.32□□□□□ -0.28
MDC1-209ENST00000613547 MMP20O60882 483 aa13.32□□□□□ -0.28
MDC1-209ENST00000613547 TM7SF2O76062 418 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms