RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	RASGRP1	O95267	797 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	C6	P13671	934 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	DES	P17661	470 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	XPA	P23025	273 aa	Predicted RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	HTR1B	P28222	390 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	RBMS1	P29558	406 aa	Known RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	PDX1	P52945	283 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	TPI1	P60174	286 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	CXADR	P78310	365 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	RHD	Q02161	417 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	MAMLD1	Q13495	774 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	MTM1	Q13496	603 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	C1orf61	Q13536	156 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	RFTN1	Q14699	578 aa	Predicted RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	NFATC4	Q14934	902 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	ALG11	Q2TAA5	492 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	PLEKHA7	Q6IQ23	1121 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	ESRP1	Q6NXG1	681 aa	Known RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	ERAP2	Q6P179	960 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	DCUN1D2	Q6PH85	259 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	SASS6	Q6UVJ0	657 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	CLEC14A	Q86T13	490 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	PSTK	Q8IV42	348 aa	Known RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	ATL2	Q8NHH9	583 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	FNIP1	Q8TF40	1166 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	SHROOM3	Q8TF72	1996 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	KCNE4	Q8WWG9	221 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	SCG3	Q8WXD2	468 aa	Known RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	ECHDC3	Q96DC8	303 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	CCDC97	Q96F63	343 aa	Predicted RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	EXOC2	Q96KP1	924 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	NCAPG	Q9BPX3	1015 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	APOO	Q9BUR5	198 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	SEPT11	Q9NVA2	429 aa	Known RBP	11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	ATP8A1	Q9Y2Q0	1164 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	DGKB	Q9Y6T7	804 aa		11.22	□□□□□ -0.61
CBWD1-222	ENST00000613508	TMEM191C	A6NGB0	347 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	CAPN8	A6NHC0	703 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ARHGAP42	A6NI28	874 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	PIGN	O95427	931 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	PRB1	P04280	392 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	HOXC4	P09017	264 aa	Predicted RBP	11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ATP1A3	P13637	1013 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	SERPINA4	P29622	427 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	HCAR3	P49019	387 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	LIG3	P49916	1009 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	PAPOLA	P51003	745 aa	Known RBP	11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ZNF135	P52742	658 aa	Predicted RBP	11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	INPP5A	Q14642	412 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	C3orf38	Q5JPI3	329 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ERMARD	Q5T6L9	678 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	SRL	Q86TD4	932 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ZSWIM9	Q86XI8	627 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	CAMK1D	Q8IU85	385 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ZNF843	Q8N446	348 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ARL14	Q8N4G2	192 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ARFGAP1	Q8N6T3	406 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	NETO2	Q8NC67	525 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	OR6C4	Q8NGE1	309 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	WDR36	Q8NI36	951 aa	Known RBP	11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	LIN37	Q96GY3	246 aa	Predicted RBP	11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	CCDC3	Q9BQI4	270 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	EDEM3	Q9BZQ6	932 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	SLC39A8	Q9C0K1	460 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	ATP13A3	Q9H7F0	1226 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	TAS2R14	Q9NYV8	317 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	AP4E1	Q9UPM8	1137 aa		11.21	□□□□□ -0.61
CBWD1-222	ENST00000613508	RP1	P56715	2156 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	CCDC187	A0A096LP49	1063 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	TMX2-CTNND1	H3BSU7	103 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	EEF2K	O00418	725 aa	Known RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	TNFRSF10C	O14798	259 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	KLK10	O43240	276 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	PALM	O75781	387 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	CELA2B	P08218	269 aa	Predicted RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	ITGA2B	P08514	1039 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	GZMA	P12544	262 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	CDK11B	P21127	795 aa	Known RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	TRIM23	P36406	574 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	RGR	P47804	291 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	KIAA1024L	P59773	190 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	SRP54	P61011	504 aa	Known RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	POLR2L	P62875	67 aa	Known RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	RALGDS	Q12967	914 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	EIF3I	Q13347	325 aa	Known RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	SPIDR	Q14159	915 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	CA9	Q16790	459 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	CFAP58	Q5T655	872 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	OGFOD3	Q6PK18	319 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	RFX8	Q6ZV50	586 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	GKN2	Q86XP6	184 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	HID1	Q8IV36	788 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	ARHGAP12	Q8IWW6	846 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	KY	Q8NBH2	561 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	TSEN2	Q8NCE0	465 aa	Known RBP	11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	PCDH19	Q8TAB3	1148 aa		11.2	□□□□□ -0.62
CBWD1-222	ENST00000613508	TSACC	Q96A04	125 aa	Predicted RBP	11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms