RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 RBM22Q9NW64 420 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 UCKL1Q9NWZ5 548 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 KLF15Q9UIH9 416 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 ATP8A1Q9Y2Q0 1164 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 MYLKQ15746 1914 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 MAP1BP46821 2468 aaKnown RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 F5H423 210 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 APOL1O14791 398 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 MATN3O15232 486 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 JCHAINP01591 159 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 ATXN1LP0C7T5 689 aaKnown RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 MYF5P13349 255 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 EPHA8P29322 1005 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 SERPINA4P29622 427 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 SLC1A1P43005 524 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 LIG3P49916 1009 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 CLDN6P56747 220 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 SGCGQ13326 291 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 TRIP6Q15654 476 aaKnown RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 CCDC157Q569K6 752 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 LRRC38Q5VT99 294 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 DBX2Q6ZNG2 339 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 RFLNAQ6ZTI6 216 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 KANSL1Q7Z3B3 1105 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 TSPAN33Q86UF1 283 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 MAP7D3Q8IWC1 876 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 PAF1Q8N7H5 531 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 PLA2G15Q8NCC3 412 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 CCNYQ8ND76 341 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 BAHD1Q8TBE0 780 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 RHBDD1Q8TEB9 315 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 SAP25Q8TEE9 199 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 CENPTQ96BT3 561 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 ZNF641Q96N77 438 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 TUBGCP5Q96RT8 1024 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 CEP295Q9C0D2 2601 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 BRD8Q9H0E9 1235 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 SEPT10Q9P0V9 454 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 B4GALT6Q9UBX8 382 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 PACSIN2Q9UNF0 486 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-208ENST00000613138 PCDHB9Q9Y5E1 797 aa12.75□□□□□ -0.37
CSTF1-208ENST00000613138 RP1P56715 2156 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 ARHGEF17Q96PE2 2063 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 A0A0A6YYK5 440 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 MACROD2A1Z1Q3 448 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 GRID2IPA4D2P6 1211 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 A6NNZ2 444 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 HTRA2O43464 458 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 TM7SF2O76062 418 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 PCCBP05166 539 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 MMP2P08253 660 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 ALPIP09923 528 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 CCNB1P14635 433 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 PMLP29590 882 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 NUDT1P36639 197 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 RENBPP51606 427 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 VAV2P52735 878 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 NAP1L1P55209 391 aaKnown RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 AP1S1P61966 158 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 SLC14A1Q13336 389 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 PDE1CQ14123 709 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 FZD2Q14332 565 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 TAZQ16635 292 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 WSCD2Q2TBF2 565 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 SLC45A4Q5BKX6 768 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 C11orf63Q6NUN7 778 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 BRAT1Q6PJG6 821 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 CCDC13Q8IYE1 715 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 RBFAQ8N0V3 343 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 EID2Q8N6I1 236 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 CNTD1Q8N815 330 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 ARRDC2Q8TBH0 407 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-208ENST00000613138 OLFM3Q96PB7 478 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 TSGA13Q96PP4 275 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 FAM118BQ9BPY3 351 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 HEMGNQ9BXL5 484 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 SLC32A1Q9H598 525 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 GPR27Q9NS67 375 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 TOR4AQ9NXH8 423 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 CHKBQ9Y259 395 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 RAI2Q9Y5P3 530 aa12.74□□□□□ -0.37
CSTF1-208ENST00000613138 ACACBO00763 2458 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 hCG_1818297A0A087WSY0 165 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 NPIPB15A6NHN6 443 aaPredicted RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 PJA2O43164 708 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms