RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RFX3P48380 749 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PPP3CCP48454 512 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 COPAP53621 1224 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ZNF284Q2VY69 593 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 HIST1H2AHQ96KK5 128 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 HIST1H2AJQ99878 128 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 H2AFJQ9BTM1 129 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TXLNGYQ9BZA5 131 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 EURLQ9NYK6 297 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ADA2Q9NZK5 511 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 SOX13Q9UN79 622 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 FCF1Q9Y324 198 aaKnown RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 COQ4Q9Y3A0 265 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 SEC16AO15027 2179 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TEX28O15482 410 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PHGDHO43175 533 aaKnown RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 GPD2P43304 727 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CSHL1Q14406 222 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 C6orf52Q5T4I8 152 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ATXN7L2Q5T6C5 722 aaPredicted RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 STRA8Q7Z7C7 330 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 HPS6Q86YV9 775 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 KIAA2013Q8IYS2 634 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 OR10T2Q8NGX3 314 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CYB5D2Q8WUJ1 264 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 DDX1Q92499 740 aaKnown RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 RNF157Q96PX1 679 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PANX3Q96QZ0 392 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 DCLK3Q9C098 648 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ZYG11BQ9C0D3 744 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CASS4Q9NQ75 786 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ARHGEF4Q9NR80 690 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CLCA2Q9UQC9 943 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 C1orf232A0A0U1RR37 186 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 NBNO60934 754 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 FAM58BPP0C7Q3 252 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 EEF1DP29692 281 aaKnown RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ARL4DP49703 201 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 NME5P56597 212 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ART3Q13508 389 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PLCL1Q15111 1095 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CARTPTQ16568 116 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 RBBP7Q16576 425 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 RAB6CQ53S08 254 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 POLNQ7Z5Q5 900 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 C2orf73Q8N5S3 287 aaPredicted RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 C3orf58Q8NDZ4 430 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 C17orf50Q8WW18 174 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 IGSF21Q96ID5 467 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 HAUS8Q9BT25 410 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 RAB6CQ9H0N0 254 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TLR9Q9NR96 1032 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CD84Q9UIB8 345 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 INVSQ9Y283 1065 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 EVPLQ92817 2033 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 SSC5DA1L4H1 1573 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ATRXP46100 2492 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CFAP99D6REC4 459 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 INPPL1O15357 1258 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 VIPR2P41587 438 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 STT3AP46977 705 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 STX3Q13277 289 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ITGADQ13349 1161 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 ANKRD20A4Q4UJ75 823 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TAS1R1Q7RTX1 841 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 RAD9AQ99638 391 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 WRAP53Q9BUR4 548 aaKnown RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PCDH18Q9HCL0 1135 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PTTG2Q9NZH5 202 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 WARS2Q9UGM6 360 aaKnown RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 MCM3APO60318 1980 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 EFCAB14O75071 495 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ADAMTS4O75173 837 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 DAOAP59103 153 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 TEAD2Q15562 447 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 KLHL35Q6PF15 583 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 GLT6D1Q7Z4J2 308 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ZNF786Q8N393 782 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SEC14L1Q92503 715 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 VCPIP1Q96JH7 1222 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ACAT2Q9BWD1 397 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ABCB8Q9NUT2 735 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ZFP37Q9Y6Q3 630 aaPredicted RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 DOCK3Q8IZD9 2030 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 TPST1O60507 370 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SUPT7LO94864 414 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 GJB5O95377 273 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 GEMP55040 296 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 MOGSQ13724 837 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 FLOT2Q14254 428 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SLC25A52Q3SY17 297 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 IFNEQ86WN2 208 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 PDZD8Q8NEN9 1154 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 MYLIPQ8WY64 445 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 GFM2Q969S9 779 aaKnown RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SMOQ99835 787 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms