RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CARD16Q5EG05 197 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 RNASEH2BQ5TBB1 312 aaKnown RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SLC9A4Q6AI14 798 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 DPY19L3Q6ZPD9 716 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 B4GALNT4Q76KP1 1039 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SPATS2Q86XZ4 545 aaKnown RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 CACUL1Q86Y37 369 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 ATPAF2Q8N5M1 289 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 PQLC3Q8N755 202 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SUMF1Q8NBK3 374 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 TMIEQ8NEW7 156 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 OR2AP1Q8NGE2 309 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 UHMK1Q8TAS1 419 aaKnown RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 ACTL9Q8TC94 416 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 NSMCE1Q8WV22 266 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 FAM122AQ96E09 287 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 LRIG1Q96JA1 1093 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 LOXL4Q96JB6 756 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 PWWP2AQ96N64 755 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 HEPHQ9BQS7 1158 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 FAM117AQ9C073 453 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 TNKS2Q9H2K2 1166 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SGK2Q9HBY8 427 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 WSB2Q9NYS7 404 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 LGALS13Q9UHV8 139 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 MBD1Q9UIS9 605 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 PPM1HQ9ULR3 514 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SMG5Q9UPR3 1016 aaKnown RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SHOC2Q9UQ13 582 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 INVSQ9Y283 1065 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 RRP15Q9Y3B9 282 aaKnown RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 MFHAS1Q9Y4C4 1052 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 ACTL7AQ9Y615 435 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 ATXN2Q99700 1313 aaKnown RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 USP34Q70CQ2 3546 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 C5orf60A6NFR6 353 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 APOC4-APOC2K7ER74 178 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 APOL1O14791 398 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 MFSD11O43934 449 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 NDUFS2O75306 463 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 POP4O95707 220 aaKnown RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 IGSF6O95976 241 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 APOC2P02655 101 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 ETS1P14921 441 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 PECAM1P16284 738 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 BCKDHBP21953 392 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 MAGEA4P43358 317 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 PSMD8P48556 350 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 RENBPP51606 427 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 CCNHP51946 323 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 RHOAP61586 193 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 RAD51Q06609 339 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 CCDC15Q0P6D6 951 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 GALNT2Q10471 571 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 GPS1Q13098 491 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 STAT4Q14765 748 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 CYTH1Q15438 398 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 LONRF1Q17RB8 773 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 PMS2CLQ68D20 193 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 LAIR1Q6GTX8 287 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 ARHGAP36Q6ZRI8 547 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 BZW1Q7L1Q6 419 aaKnown RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 LPCAT2Q7L5N7 544 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 TAOK1Q7L7X3 1001 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 PCGF5Q86SE9 256 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 EXOC3L1Q86VI1 746 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 RFX6Q8HWS3 928 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 TP53INP2Q8IXH6 220 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 BBS5Q8N3I7 341 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 NETO2Q8NC67 525 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 PIP4K2CQ8TBX8 421 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 MDM1Q8TC05 714 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 HAUS1Q96CS2 278 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 TOE1Q96GM8 510 aaKnown RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 TTC25Q96NG3 672 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 RBM15Q96T37 977 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 PHOX2BQ99453 314 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 OMDQ99983 421 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 TMEM121Q9BTD3 319 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 TM6SF2Q9BZW4 377 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 FAM107BQ9H098 131 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 BTBD1Q9H0C5 482 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 DUSP15Q9H1R2 295 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 RABEP2Q9H5N1 569 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 CCDC134Q9H6E4 229 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 CD93Q9NPY3 652 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 FBXL12Q9NXK8 326 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 EURLQ9NYK6 297 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 HECAQ9UBI9 543 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-217ENST00000611848 IL36AQ9UHA7 158 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 FZD4Q9ULV1 537 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 KNL1Q8NG31 2342 aa8.92□□□□□ -0.98
SMAD4-217ENST00000611848 VPS13AQ96RL7 3174 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 A0A1W2PP55 124 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PRR23AA6NEV1 266 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SMIM23A6NLE4 172 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 E7EVH7 732 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SMAPO00193 183 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GPR37O15354 613 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms