RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 MRGBPQ9NV56 204 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 SEPT10Q9P0V9 454 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
RTN1-209ENST00000611068 TSC2P49815 1807 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 TEX28O15482 410 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 ARL4AP40617 200 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 ALDH7A1P49419 539 aaKnown RBP16.1■□□□□ 0.17
RTN1-209ENST00000611068 DUSP4Q13115 394 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 SMYD5Q6GMV2 418 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 SYDE1Q6ZW31 735 aaPredicted RBP16.1■□□□□ 0.17
RTN1-209ENST00000611068 OTOP2Q7RTS6 562 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 FAM20CQ8IXL6 584 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 OR7G1Q8NGA0 311 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 NT5C3BQ969T7 300 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 COLEC11Q9BWP8 271 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 CCDC68Q9H2F9 335 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 RETREG1Q9H6L5 497 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 WDCPQ9H6R7 721 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 XPO7Q9UIA9 1087 aaKnown RBP16.1■□□□□ 0.17
RTN1-209ENST00000611068 CDY1Q9Y6F8 540 aa16.1■□□□□ 0.17
RTN1-209ENST00000611068 DNALI1O14645 258 aaPredicted RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 TM9SF1O15321 606 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 IKBKEQ14164 716 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 NDUFA5Q16718 116 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 TRIM16LQ309B1 348 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 FGD3Q5JSP0 725 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 DRICH1Q6PGQ1 229 aaPredicted RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 DEPDC1BQ8WUY9 529 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 RILPQ96NA2 401 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 MECRQ9BV79 373 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 ERGIC3Q9Y282 383 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 CHD7Q9P2D1 2997 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 VWA8A3KMH1 1905 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 AVILO75366 819 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 DNAJB2P25686 324 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 ADRA1BP35368 520 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 ETV4P43268 484 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 GNA12Q03113 381 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 EFHC2Q5JST6 749 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 BTBD8Q5XKL5 378 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 NCBP2-AS2Q69YL0 99 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 KCNT2Q6UVM3 1135 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 SCD5Q86SK9 330 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 TICAM1Q8IUC6 712 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 CCNYQ8ND76 341 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 PDZD8Q8NEN9 1154 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 MZB1Q8WU39 189 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 CRISPLD2Q9H0B8 497 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 ELAC1Q9H777 363 aaKnown RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 PIH1D1Q9NWS0 290 aaKnown RBP16.09■□□□□ 0.17
RTN1-209ENST00000611068 GNPTGQ9UJJ9 305 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 PSMD13Q9UNM6 376 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
RTN1-209ENST00000611068 PSMD11O00231 422 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 EEF2KO00418 725 aaKnown RBP16.08■□□□□ 0.17
RTN1-209ENST00000611068 MFSD11O43934 449 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 KLHL41O60662 606 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 MAPRE1Q15691 268 aaKnown RBP16.08■□□□□ 0.17
RTN1-209ENST00000611068 PUS10Q3MIT2 529 aaKnown RBP16.08■□□□□ 0.17
RTN1-209ENST00000611068 MSS51Q4VC12 460 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 ITIH5Q86UX2 942 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 TRPC4APQ8TEL6 797 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 CPT1BQ92523 772 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 FAR2Q96K12 515 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 ZNF670Q9BS34 389 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 DTLQ9NZJ0 730 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 RABGEF1Q9UJ41 708 aa16.08■□□□□ 0.17
RTN1-209ENST00000611068 TNFRSF10BO14763 440 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 LPXNO60711 386 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 HMBSP08397 361 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 CLTBP09497 229 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 SCNN1AP37088 669 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 FNBP1LQ5T0N5 605 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 SIGIRRQ6IA17 410 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 ARCQ7LC44 396 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 DCP1BQ8IZD4 617 aaKnown RBP16.08■□□□□ 0.16
RTN1-209ENST00000611068 SLC38A6Q8IZM9 456 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 DEFB107AQ8IZN7 70 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 LILRA2Q8N149 483 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 APBB2Q92870 758 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 UNKQ9C0B0 810 aaKnown RBP16.08■□□□□ 0.16
RTN1-209ENST00000611068 COPS7BQ9H9Q2 264 aaPredicted RBP16.08■□□□□ 0.16
RTN1-209ENST00000611068 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 QPCTLQ9NXS2 382 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 TBX21Q9UL17 535 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 CDH7Q9ULB5 785 aa16.08■□□□□ 0.16
RTN1-209ENST00000611068 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 PSMC3P17980 439 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 JAK1P23458 1154 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 NKX2-5P52952 324 aaPredicted RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 RARS2Q5T160 578 aaKnown RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 RNASEH2BQ5TBB1 312 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms