RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DCAF12L2Q5VW00 463 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 AWAT2Q6E213 333 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ITPRIPL1Q6GPH6 555 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 KLHL24Q6TFL4 600 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 COLCA1Q6ZS62 124 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 TRILQ7L0X0 811 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 GSTA5Q7RTV2 222 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 IRF2BP2Q7Z5L9 587 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 CTU1Q7Z7A3 348 aaKnown RBP4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 PCGF5Q86SE9 256 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 PIM3Q86V86 326 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ZCCHC9Q8N567 271 aaKnown RBP4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 TEX45Q8NA69 505 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 GTF3C6Q969F1 213 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 FAM149B1Q96BN6 582 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 OTULINQ96BN8 352 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 PERPQ96FX8 193 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 TIGD1Q96MW7 591 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 TREX2Q9BQ50 279 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ITPAQ9BY32 194 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 KRCC1Q9NPI7 259 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 EIF2B3Q9NR50 452 aaKnown RBP4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 SMYD2Q9NRG4 433 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 HAO1Q9UJM8 370 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 A3GALT2U3KPV4 340 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 A0A0U1RQF3 1178 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 FAM237BA0A1B0GVD1 139 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 FSD2A1L4K1 749 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 ANKRD18BA2A2Z9 1011 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 BCAT2O15382 392 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 SEC14L5O43304 696 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 RGS11O94810 467 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 CYP1A2P05177 515 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 HOXB5P09067 269 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 ETFAP13804 333 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 TNFRSF1BP20333 461 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 ITGAXP20702 1163 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 TKTP29401 623 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 CDAP32320 146 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 PBX3P40426 434 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 CLNS1AP54105 237 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 P2RX3P56373 397 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 ZP1P60852 638 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 PPATQ06203 517 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 GPR18Q14330 331 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 FRG1Q14331 258 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 SOWAHAQ2M3V2 549 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 TCTN1Q2MV58 587 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 DCAF6Q58WW2 860 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 PARP16Q8N5Y8 322 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 FRMD1Q8N878 549 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 C7orf57Q8NEG2 295 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 TMEM163Q8TC26 289 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 NEK9Q8TD19 979 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 PSPC1Q8WXF1 523 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 PABPC5Q96DU9 382 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 MSTO1Q9BUK6 570 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 MUC13Q9H3R2 512 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 PLEKHA4Q9H4M7 779 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 CATSPERBQ9H7T0 1116 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 BPIFA1Q9NP55 256 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 SLC6A13Q9NSD5 602 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 EHD2Q9NZN4 543 aa4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 FBXO2Q9UK22 296 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 FBXO9Q9UK97 447 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 SRPRBQ9Y5M8 271 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-213ENST00000609587 MS4A18H0YCH9 400 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 KLK8O60259 260 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 PAGE4O60829 102 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 PTP4A3O75365 173 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 EIF2S1P05198 315 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 PSG1P11464 419 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 KRT10P13645 584 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MYF6P23409 242 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MAPK4P31152 587 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MLH1P40692 756 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 PIP4K2AP48426 406 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 ENTPD1P49961 510 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 FGFBP1Q14512 234 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MED22Q15528 200 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 ALG11Q2TAA5 492 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 TSSK4Q6SA08 328 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 CYP20A1Q6UW02 462 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 LCTLQ6UWM7 567 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 CLEC4GQ6UXB4 293 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 Q6ZTK2 550 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MON1BQ7L1V2 547 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 PATL1Q86TB9 770 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 NOXA1Q86UR1 476 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MB21D2Q8IYB1 491 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 CCDC105Q8IYK2 499 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 TMEM116Q8NCL8 245 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 GPT2Q8TD30 523 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 USP6NLQ92738 828 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 SNAPC3Q92966 411 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 ARHGEF2Q92974 986 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 FBXL8Q96CD0 374 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 APOLD1Q96LR9 279 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms