RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 GDPD3Q7L5L3 318 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 CDR2LQ86X02 465 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 SYTL1Q8IYJ3 562 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 PNPT1Q8TCS8 783 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 SH3KBP1Q96B97 665 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 PRRG3Q9BZD7 231 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 DSN1Q9H410 356 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 UBE4BO95155 1302 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 KRT87PA6NCN2 255 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 ALOX12P18054 663 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 SOX11P35716 441 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 TGFBR1P36897 503 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 GARSP41250 739 aaKnown RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 HTR3AP46098 478 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 CDK8P49336 464 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 ACTR2P61160 394 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 TCP10Q12799 353 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 INTS11Q5TA45 600 aaKnown RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 DHFR2Q86XF0 187 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 DDIASQ8IXT1 998 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 BEX2Q9BXY8 128 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 DPP3Q9NY33 737 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 SMPD3Q9NY59 655 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 AGRPO00253 132 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 PLK4O00444 970 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 NOS1APO75052 506 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 MT-ND1P03886 318 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 ALDOAP04075 364 aaKnown RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 GAP43P17677 238 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 ATP6V1B2P21281 511 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 SHMT2P34897 504 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 PTGER2P43116 358 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 FKBP1AP62942 108 aaKnown RBP12.64□□□□□ -0.39
CTCFL-218ENST00000608440 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 YIF1BQ5BJH7 314 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 C16orf86Q6ZW13 317 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 LACC1Q8IV20 430 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 METTL4Q8N3J2 472 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 PROX1Q92786 737 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 C9orf16Q9BUW7 83 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 CHRAC1Q9NRG0 131 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 RAB6BQ9NRW1 208 aa12.64□□□□□ -0.39
CTCFL-218ENST00000608440 TYW5A2RUC4 315 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 SLC9A3R1O14745 358 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 GLRA3O75311 464 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 RBP1P09455 135 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 SLURP2P0DP57 97 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 SHEQ5VZ18 495 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 MON1BQ7L1V2 547 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 SPPL2CQ8IUH8 684 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 NLGN4XQ8N0W4 816 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PACRGLQ8N7B6 248 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 TTC9Q92623 222 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 ST6GAL2Q96JF0 529 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 RPL10LQ96L21 214 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 ZBTB26Q9HCK0 441 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 POLMQ9NP87 494 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PCDHB12Q9Y5F1 795 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 ZNF646O15015 1829 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 ISPDA4D126 451 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PTGES3LE9PB15 166 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 TADA2AO75478 443 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PRKD3O94806 890 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PRKCGP05129 697 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 JUNP05412 331 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PGK2P07205 417 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PSKH1P11801 424 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PRKCHP24723 683 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 CBX5P45973 191 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 NCS1P62166 190 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 SPIRE1Q08AE8 756 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 TBRG1Q3YBR2 411 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 RAP1GAP2Q684P5 730 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 EID3Q8N140 333 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 SHCBP1Q8NEM2 672 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 NLGN2Q8NFZ4 835 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 TTLQ8NG68 377 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 TOE1Q96GM8 510 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 MRPL47Q9HD33 250 aaKnown RBP12.63□□□□□ -0.39
CTCFL-218ENST00000608440 PNPLA8Q9NP80 782 aa12.63□□□□□ -0.39
CTCFL-218ENST00000608440 EGFL7Q9UHF1 273 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms