RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 GAS2L3Q86XJ1 694 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 CNGA4Q8IV77 575 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTSA-210ENST00000606000 PAF1Q8N7H5 531 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 HCAR2Q8TDS4 363 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 PDCD6IPQ8WUM4 868 aaKnown RBP12.38□□□□□ -0.43
CTSA-210ENST00000606000 ASB12Q8WXK4 309 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 FAF2Q96CS3 445 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 SMIM14Q96QK8 99 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 ZNF670Q9BS34 389 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 NOD2Q9HC29 1040 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 RCOR3Q9P2K3 495 aaPredicted RBP12.38□□□□□ -0.43
CTSA-210ENST00000606000 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 SCAMP1O15126 338 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 RFPL3O75679 317 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 KRT37O76014 449 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 PCCBP05166 539 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 TNNT1P13805 278 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
CTSA-210ENST00000606000 RENBPP51606 427 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 AP1S1P61966 158 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 NSUN2Q08J23 767 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTSA-210ENST00000606000 IHHQ14623 411 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 TCEA2Q15560 299 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 ERAP2Q6P179 960 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 TMPRSS7Q7RTY8 843 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 PELI3Q8N2H9 469 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 PLA2G15Q8NCC3 412 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 ZNF548Q8NEK5 533 aaPredicted RBP12.37□□□□□ -0.43
CTSA-210ENST00000606000 RFFLQ8WZ73 363 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 NT5MQ9NPB1 228 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 SCUBE2Q9NQ36 999 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 B4GALT6Q9UBX8 382 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 OR1A2Q9Y585 309 aa12.37□□□□□ -0.43
CTSA-210ENST00000606000 LRRD1A4D1F6 860 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 HTRA2O43464 458 aaPredicted RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 LZTS3O60299 673 aaPredicted RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 MTA2O94776 668 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 CPP00450 1065 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 CSF2P04141 144 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 KRT1P04264 644 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 CELA2BP08218 269 aaPredicted RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 KRT7P08729 469 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 NME1P15531 152 aaKnown RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 KDELR1P24390 212 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 SUOXP51687 545 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 ZNF75DP51815 510 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 THOP1P52888 689 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 DSC2Q02487 901 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 C1orf61Q13536 156 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 LRRC14Q15048 493 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 PDK2Q15119 407 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 MARC1Q5VT66 337 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 LIPIQ6XZB0 460 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 DPPA4Q7L190 304 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 OR4C6Q8NH72 309 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 FAM174AQ8TBP5 190 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 ZCCHC14Q8WYQ9 949 aaKnown RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 FUBP1Q96AE4 644 aaKnown RBP12.36□□□□□ -0.43
CTSA-210ENST00000606000 ZMIZ1Q9ULJ6 1067 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 TTLL3Q9Y4R7 772 aa12.36□□□□□ -0.43
CTSA-210ENST00000606000 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 K7ESM1 405 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 HLA-DQB2P05538 268 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 PDHA1P08559 390 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 ELFN1P0C7U0 828 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 JUNDP17535 347 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 CTPS1P17812 591 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 COMTP21964 271 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 LHCGRP22888 699 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 HSPA9P38646 679 aaKnown RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 INPP5AQ14642 412 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 SMAD1Q15797 465 aaKnown RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 CNGA3Q16281 694 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 DENND2CQ68D51 928 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 NPNTQ6UXI9 565 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 MACC1Q6ZN28 852 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 TSPAN33Q86UF1 283 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 DCP2Q8IU60 420 aaKnown RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 PHACTR4Q8IZ21 702 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 TEX26Q8N6G2 289 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 PLD5Q8N7P1 536 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 LMX1AQ8TE12 382 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 NSMCE1Q8WV22 266 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 MAML1Q92585 1016 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms