RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 NPC1O15118 1278 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 TCEA3O75764 348 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 MYZAPP0CAP1 466 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 PAMP19021 973 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 TFF2Q03403 129 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 TDGQ13569 410 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 QPCTQ16769 361 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 CES3Q6UWW8 571 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 GDPD4Q6W3E5 623 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 NDUFAF2Q8N183 169 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 ZNF366Q8N895 744 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 GRIN3AQ8TCU5 1115 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 BRSK1Q8TDC3 778 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 ZBTB9Q96C00 473 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 MFSD3Q96ES6 412 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 FBRSL1Q9HCM7 1045 aaKnown RBP22.72■■□□□ 1.23
IRF3-228ENST00000601291 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.72■■□□□ 1.23
IRF3-228ENST00000601291 HACD3Q9P035 362 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 FETUBQ9UGM5 382 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 FAM169AQ9Y6X4 670 aa22.72■■□□□ 1.23
IRF3-228ENST00000601291 ALDH1A2O94788 518 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 CRTAMO95727 393 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 UGT2B4P06133 528 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 SRFP11831 508 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 HNRNPLP14866 589 aaKnown RBP eCLIP22.71■■□□□ 1.23
IRF3-228ENST00000601291 GLULP15104 373 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 FRG1Q14331 258 aaKnown RBP22.71■■□□□ 1.23
IRF3-228ENST00000601291 LONRF1Q17RB8 773 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 EGFLAMQ63HQ2 1017 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 EPS8L3Q8TE67 593 aaKnown RBP22.71■■□□□ 1.23
IRF3-228ENST00000601291 PIH1D2Q8WWB5 315 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 CDKL2Q92772 493 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 CERS2Q96G23 380 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 SRPK1Q96SB4 655 aaKnown RBP22.71■■□□□ 1.23
IRF3-228ENST00000601291 MED4Q9NPJ6 270 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 PPANQ9NQ55 473 aaKnown RBP22.71■■□□□ 1.23
IRF3-228ENST00000601291 SUN2Q9UH99 717 aa22.71■■□□□ 1.23
IRF3-228ENST00000601291 SMIM23A6NLE4 172 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 LOC730098B7Z3J9 87 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 PAPSS2O95340 614 aaPredicted RBP22.7■■□□□ 1.22
IRF3-228ENST00000601291 HLA-EP13747 358 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 PRKCHP24723 683 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 NMBRP28336 390 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 IL12RB1P42701 662 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 KBTBD12Q3ZCT8 623 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 ZNF449Q6P9G9 518 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 TXNDC11Q6PKC3 985 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 GLT6D1Q7Z4J2 308 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 ZNF513Q8N8E2 541 aaPredicted RBP22.7■■□□□ 1.22
IRF3-228ENST00000601291 OR8D1Q8WZ84 308 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 ECHDC3Q96DC8 303 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 FCRL3Q96P31 734 aaPredicted RBP22.7■■□□□ 1.22
IRF3-228ENST00000601291 SH3GL2Q99962 352 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 MTG2Q9H4K7 406 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 SLC2A4RGQ9NR83 387 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 MOCS1Q9NZB8 636 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 PHTF1Q9UMS5 762 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 WASF2Q9Y6W5 498 aa22.7■■□□□ 1.22
IRF3-228ENST00000601291 ZCWPW2A0A1B0GU75 182 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 TLDC2A0PJX2 215 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 CCDC78A2IDD5 438 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 POC1B-GALNT4F8VUJ3 575 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 NARSO43776 548 aaKnown RBP22.69■■□□□ 1.22
IRF3-228ENST00000601291 LEFTY1O75610 366 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 PRKCGP05129 697 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 PIRTP0C851 137 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 DRD1P21728 446 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 SLC8A1P32418 973 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 POLR2LP62875 67 aaKnown RBP22.69■■□□□ 1.22
IRF3-228ENST00000601291 GRSF1Q12849 480 aaKnown RBP eCLIP22.69■■□□□ 1.22
IRF3-228ENST00000601291 ELAVL3Q14576 367 aaKnown RBP22.69■■□□□ 1.22
IRF3-228ENST00000601291 PON2Q15165 354 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 TSTD2Q5T7W7 516 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 BRAT1Q6PJG6 821 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 SPOCK2Q92563 424 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 PEX13Q92968 403 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 VOPP1Q96AW1 172 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 CENPHQ9H3R5 247 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 TRABDQ9H4I3 376 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 VPS18Q9P253 973 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 SLC24A2Q9UI40 661 aa22.69■■□□□ 1.22
IRF3-228ENST00000601291 MROH6A6NGR9 719 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 FAM159BA6NKW6 160 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 C2orf81A6NN90 581 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 K7EQS6 105 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 CDH16O75309 829 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 PRNPP04156 253 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 EPHX1P07099 455 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 SLCO1A2P46721 670 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 PDE1BQ01064 536 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 TAF1AQ15573 450 aaPredicted RBP22.68■■□□□ 1.22
IRF3-228ENST00000601291 ARSIQ5FYB1 569 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 TRMT10BQ6PF06 316 aaKnown RBP22.68■■□□□ 1.22
IRF3-228ENST00000601291 CTAGE3PQ8IX95 158 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 CHPFQ8IZ52 775 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 RIBC1Q8N443 379 aaPredicted RBP22.68■■□□□ 1.22
IRF3-228ENST00000601291 ZNF778Q96MU6 729 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 KLHL32Q96NJ5 620 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 MAGEE1Q9HCI5 957 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 TREX1Q9NSU2 369 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms