RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LEPRP48357 1165 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 RALGDSQ12967 914 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 FASTKQ14296 549 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 IHHQ14623 411 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 AGKQ53H12 422 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 PIK3R6Q5UE93 754 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 TMEM102Q8N9M5 508 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 SH3RF2Q8TEC5 729 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 RSPH1Q8WYR4 309 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 PPP1R2P1Q96PQ5 205 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 SLC25A51Q9H1U9 297 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 CACNA2D2Q9NY47 1150 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 PATJQ8NI35 1801 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 UBDO15205 165 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 CD52P31358 61 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 HTR7P34969 479 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 SERPINH1P50454 418 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 GNASQ5JWF2 1037 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 HECTD2Q5U5R9 776 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 AP1ARQ63HQ0 302 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 CLEC6AQ6EIG7 209 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 PAOXQ6QHF9 649 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 SPATA2LQ8IUW3 424 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 CATSPER1Q8NEC5 780 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 ASB9Q96DX5 294 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 UTP6Q9NYH9 597 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 MYO16Q9Y6X6 1858 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 M0QZQ0 153 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 PSMD12O00232 456 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 UBFD1O14562 309 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 CLCN5P51795 746 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 CACNB2Q08289 660 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 SLC10A7Q0GE19 358 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 LRP8Q14114 963 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 REP15Q6BDI9 236 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 KLC3Q6P597 504 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 TMEM207Q6UWW9 146 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 MRPL10Q7Z7H8 261 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 OR9I1Q8NGQ6 314 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 HMCESQ96FZ2 354 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 IMP4Q96G21 291 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 UBXN10Q96LJ8 280 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 EML4Q9HC35 981 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 LZTS1Q9Y250 596 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 Q9Y3F1 56 aa20.33■□□□□ 0.85
SHKBP1-225ENST00000600733 ATP6AP2A0A1C7CYW4 349 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 OR51F1A6NGY5 319 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 GLTPD2A6NH11 291 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 ATP6AP2O75787 350 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 TFAP2AP05549 437 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 HAPLN1P10915 354 aaPredicted RBP20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 YWHAQP27348 245 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 KCNC1P48547 511 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 ARSDP51689 593 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 MLLT6P55198 1093 aaPredicted RBP20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 CDKN2DP55273 166 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 MYBPC1Q00872 1141 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 TSPY1Q01534 308 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 DSC2Q02487 901 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 TRIM25Q14258 630 aaKnown RBP20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 SDHAF4Q5VUM1 108 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 PIM3Q86V86 326 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 CILP2Q8IUL8 1156 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 SCN4BQ8IWT1 228 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 OR6P1Q8NGX9 317 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 CALML6Q8TD86 181 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 PABPC5Q96DU9 382 aaKnown RBP20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 CCDC126Q96EE4 140 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 ALG9Q9H6U8 611 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 ARNT2Q9HBZ2 717 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 SPON1Q9HCB6 807 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 ATP13A1Q9HD20 1204 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 PADI3Q9ULW8 664 aa20.33■□□□□ 0.84
SHKBP1-225ENST00000600733 INHBEP58166 350 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 STX5Q13190 355 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 SQLEQ14534 574 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 GPR158Q5T848 1215 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 LAYNQ6UX15 382 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 FAR2Q96K12 515 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 PRICKLE1Q96MT3 831 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 ZCWPW1Q9H0M4 648 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 UNC93B1Q9H1C4 597 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 SEMA6AQ9H2E6 1030 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 GSTO2Q9H4Y5 243 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 MARCH4Q9P2E8 410 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 EPS15L1Q9UBC2 864 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 VWA7Q9Y334 891 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 COMMD3-BMI1R4GMX3 469 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 PRORSD1PA6NEY8 169 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 GPR182O15218 404 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 CLPTM1O96005 669 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 RBP1P09455 135 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 ACAP2Q15057 778 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 PSMD5Q16401 504 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 IYDQ6PHW0 289 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 CYHR1Q6ZMK1 362 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 THEM5Q8N1Q8 247 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 NMD3Q96D46 503 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 SUCOQ9UBS9 1254 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 DSEQ9UL01 958 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms