RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FAM163BP0C2L3 166 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC2A3P11169 496 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ANPEPP15144 967 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 PIK3R1P27986 724 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 KLC3Q6P597 504 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ZYG11AQ6WRX3 759 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ESAMQ96AP7 390 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 MUC3BQ9H195 1237 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 TLE6Q9H808 572 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 MID2Q9UJV3 735 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ANGPTL2Q9UKU9 493 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SIX3O95343 332 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 GFAPP14136 432 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 HARS2P49590 506 aaKnown RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 TWF1Q12792 350 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 IHHQ14623 411 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 LBRQ14739 615 aaKnown RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 RANBP10Q6VN20 620 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 GK5Q6ZS86 529 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC45A3Q96JT2 553 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 BTN2A3PQ96KV6 586 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 UPF3AQ9H1J1 476 aaKnown RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 GPBP1L1Q9HC44 474 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 PLK2Q9NYY3 685 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SCML2Q9UQR0 700 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 RAP2CQ9Y3L5 183 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 TET1Q8NFU7 2136 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 A0A088AWK7 358 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 A0A1B0GVG6 124 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 IGLV3-25P01717 112 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 RHOQP17081 205 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ITGAXP20702 1163 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 FMO4P31512 558 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SEMG2Q02383 582 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 PLD1Q13393 1074 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 PPP1R3AQ16821 1122 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRMT5Q32P41 509 aaKnown RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 TSTD2Q5T7W7 516 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 HECTD2Q5U5R9 776 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SCIMPQ6UWF3 145 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 LPCAT1Q8NF37 534 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 TSGA13Q96PP4 275 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 NSMCE4AQ9NXX6 385 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDH22Q9UJ99 828 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 ZFP37Q9Y6Q3 630 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 SCN10AQ9Y5Y9 1956 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 GPR39O43194 453 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 CABYRO75952 493 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 SBK3P0C264 359 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 AOC1P19801 751 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 MRPS22P82650 360 aaKnown RBP11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 PRKAA1Q13131 559 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 HNRNPDQ14103 355 aaKnown RBP11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 MAP3K21Q5TCX8 1036 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 EPGNQ6UW88 154 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 DDIASQ8IXT1 998 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 PGBD5Q8N414 524 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 CCDC68Q9H2F9 335 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 SRRDQ9UH36 339 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 PTGDR2Q9Y5Y4 395 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 RALGAPA2Q2PPJ7 1873 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 NBNO60934 754 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 CRCPO75575 148 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 TACR2P21452 398 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 CASP2P42575 452 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDKN2DP55273 166 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRIM71Q2Q1W2 868 aaKnown RBP11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 KIF19Q2TAC6 998 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 KBTBD2Q8IY47 623 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 ATP13A1Q9HD20 1204 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 HMX1Q9NP08 348 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 DNAJC28Q9NX36 388 aa11.59□□□□□ -0.55
ARHGEF1-220ENST00000600274 AP3B1O00203 1094 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 PPP6CO00743 305 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 ENPP3O14638 875 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 GOT2P00505 430 aaKnown RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 ATP6V1B1P15313 513 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 RAG1P15918 1043 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 ITGB6P18564 788 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 ZNF135P52742 658 aaPredicted RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 IRF5Q13568 498 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 CYLC2Q14093 348 aaPredicted RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 PFKFB4Q16877 469 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 AGAP9Q5VTM2 703 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 CLEC14AQ86T13 490 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 SPATA24Q86W54 205 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 ABTB1Q969K4 478 aaPredicted RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 CINPQ9BW66 212 aaPredicted RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 TM6SF2Q9BZW4 377 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 POLR1EQ9GZS1 481 aaKnown RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 FBRSL1Q9HCM7 1045 aaKnown RBP11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 VWA7Q9Y334 891 aa11.58□□□□□ -0.55
ARHGEF1-220ENST00000600274 OAZ2O95190 189 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms