RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 GNSP15586 552 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 NUDT1P36639 197 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 AFF3P51826 1226 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 RPS21P63220 83 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 SKOR1P84550 965 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 OTUD4Q01804 1114 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 SEMG2Q02383 582 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 XRCC4Q13426 336 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 GCNT7Q6ZNI0 430 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 PRPF39Q86UA1 669 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 ZC3H18Q86VM9 953 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 CBARPQ8N350 705 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 C12orf50Q8NA57 414 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 ASB12Q8WXK4 309 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 RMDN1Q96DB5 314 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 SERAC1Q96JX3 654 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 SMIM14Q96QK8 99 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 TDRD1Q9BXT4 1180 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 FZD3Q9NPG1 666 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 GPR27Q9NS67 375 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 DLL3Q9NYJ7 618 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 R3HDM2Q9Y2K5 976 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 CTSKP43235 329 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 KIF19Q2TAC6 998 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 AASDHQ4L235 1098 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 SETMARQ53H47 684 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 TEX44Q53QW1 395 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 SLC45A4Q5BKX6 768 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 STPG1Q5TH74 334 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 KDM7AQ6ZMT4 941 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 BZW1Q7L1Q6 419 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 TFB1MQ8WVM0 346 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 IMP4Q96G21 291 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 FEM1CQ96JP0 617 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 BMFQ96LC9 184 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 TEKT5Q96M29 485 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 LENG8Q96PV6 779 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 MCCC1Q96RQ3 725 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 FAM118BQ9BPY3 351 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 GORASP1Q9BQQ3 440 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 NUSAP1Q9BXS6 441 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 SLC17A9Q9BYT1 436 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 IL21RQ9HBE5 538 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 PCDHB9Q9Y5E1 797 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 RAI2Q9Y5P3 530 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 SNX11Q9Y5W9 270 aa19.63■□□□□ 0.73
SHKBP1-221ENST00000599833 CNOT1A5YKK6 2376 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 HACD1B0YJ81 288 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 PRAMEF26H0Y7S4 382 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 H0Y8X5 98 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 SLC31A1O15431 190 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 MMP20O60882 483 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 PAK4O96013 591 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 LHCGRP22888 699 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 ARHGAP8P85298 464 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 AGERQ15109 404 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 DPPA4Q7L190 304 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 ABI3BPQ7Z7G0 1075 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 ZSCAN30Q86W11 494 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 SPATS2Q86XZ4 545 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 TP53I13Q8NBR0 393 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 NETO1Q8TDF5 533 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 UBE2Q2Q8WVN8 375 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 CENPTQ96BT3 561 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 AGAP3Q96P47 875 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 TRIB3Q96RU7 358 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 WRAP53Q9BUR4 548 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 USP29Q9HBJ7 922 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 DNAAF2Q9NVR5 837 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 ANKRD6Q9Y2G4 727 aa19.62■□□□□ 0.73
SHKBP1-221ENST00000599833 SLC30A4O14863 429 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 CPP00450 1065 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 HNRNPA2B1P22626 353 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 CES1P23141 567 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 RBL1P28749 1068 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 CD38P28907 300 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 CD86P42081 329 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 CLDN2P57739 230 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 ELP6Q0PNE2 266 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 SHBQ15464 509 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 RSPO4Q2I0M5 234 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 ZNF567Q8N184 647 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 MINDY1Q8N5J2 469 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 MFSD2AQ8NA29 543 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 HTR3CQ8WXA8 447 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 SLC25A51Q9H1U9 297 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 GLOD4Q9HC38 313 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 B4GALT6Q9UBX8 382 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 PYCARDQ9ULZ3 195 aa19.61■□□□□ 0.73
SHKBP1-221ENST00000599833 A0A1W2PQ67 120 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 CFAP69A5D8W1 941 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 POM121BA6NF01 834 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 NPIPB15A6NHN6 443 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 USP27XA6NNY8 438 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 C4orf47A7E2U8 309 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 NRDCO43847 1150 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 TJP3O95049 919 aa19.6■□□□□ 0.73
SHKBP1-221ENST00000599833 C6P13671 934 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms