RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 S1PR4O95977 384 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 PRLP01236 227 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 GM2AP17900 193 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 CR2P20023 1033 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 ELF1P32519 619 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 GRIA4P48058 902 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 NAGLUP54802 743 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 ARF5P84085 180 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 CSHL1Q14406 222 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 FAM91A1Q658Y4 838 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 TMEM207Q6UWW9 146 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 KIAA0408Q6ZU52 694 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 WFDC5Q8TCV5 224 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 AGAP11Q8TF27 550 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 ANKRD49Q8WVL7 239 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 CINPQ9BW66 212 aaPredicted RBP14.55□□□□□ -0.08
VRK3-217ENST00000599538 MFSD1Q9H3U5 465 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 TLE6Q9H808 572 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 MAN1C1Q9NR34 630 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 IGSF5Q9NSI5 407 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 SEPT3Q9UH03 358 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 TBC1D30Q9Y2I9 924 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 CRYL1Q9Y2S2 319 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 L3MBTL1Q9Y468 752 aa14.55□□□□□ -0.08
VRK3-217ENST00000599538 ILVBLA1L0T0 632 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 KLHL2O95198 593 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 GOT2P00505 430 aaKnown RBP14.54□□□□□ -0.08
VRK3-217ENST00000599538 C1RP00736 705 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 FGF1P05230 155 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 ESRRAP11474 423 aaPredicted RBP14.54□□□□□ -0.08
VRK3-217ENST00000599538 BMP1P13497 986 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 HLA-DPA1P20036 260 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CALB2P22676 271 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 MPSTP25325 297 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CA8P35219 290 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 RASSF2P50749 326 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CDKN2DP55273 166 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 POU4F1Q01851 419 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 RCN2Q14257 317 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 PIM3Q86V86 326 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 TCEAL8Q8IYN2 117 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 RAB3IPQ96QF0 476 aaPredicted RBP14.54□□□□□ -0.08
VRK3-217ENST00000599538 BTBD10Q9BSF8 475 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 ZBED2Q9BTP6 218 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 PCDHGC4Q9Y5F7 938 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 KIAA1671Q9BY89 1806 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 OBSL1O75147 1896 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 ANKRD36A6QL64 1941 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CCDC162PA2VCL2 907 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CCDC22O60826 627 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 TBL1XO60907 577 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 LILRB3O75022 631 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 TIMP1P01033 207 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 EPOP01588 193 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 SERPINA6P08185 405 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 COL6A2P12110 1019 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 ALOX15P16050 662 aaPredicted RBP14.54□□□□□ -0.08
VRK3-217ENST00000599538 LAG3P18627 525 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CRABP2P29373 138 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 MNAT1P51948 309 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 CYP4F8P98187 520 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 ACVR1Q04771 509 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 KDSRQ06136 332 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 SLC9B1Q4ZJI4 515 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 HECTD2Q5U5R9 776 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 LIPMQ5VYY2 423 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 SUGP1Q8IWZ8 645 aaKnown RBP14.54□□□□□ -0.08
VRK3-217ENST00000599538 CALML6Q8TD86 181 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 YME1L1Q96TA2 773 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 MUC3BQ9H195 1237 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 COG4Q9H9E3 785 aa14.54□□□□□ -0.08
VRK3-217ENST00000599538 MRPL17Q9NRX2 175 aaKnown RBP14.54□□□□□ -0.08
VRK3-217ENST00000599538 CHD7Q9P2D1 2997 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 GSC2O15499 205 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 INSIG1O15503 277 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 DIAPH2O60879 1101 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 NDST3O95803 873 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 CNPP09543 421 aaKnown RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 GJA1P17302 382 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 KCNA5P22460 613 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 EPHB3P54753 998 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 SLC12A2P55011 1212 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 ARL13AQ5H913 290 aaPredicted RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 FAM219BQ5XKK7 198 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 ZNF549Q6P9A3 640 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 GAREM2Q75VX8 874 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 CHST9Q7L1S5 443 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 CMTR2Q8IYT2 770 aaKnown RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 HS6ST3Q8IZP7 471 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 LSMEM2Q8N112 164 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 CARNMT1Q8N4J0 409 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 TXNDC5Q8NBS9 432 aaKnown RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 MDGA1Q8NFP4 955 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 BRSK1Q8TDC3 778 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 PPP1R36Q96LQ0 422 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 TSNARE1Q96NA8 513 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 CDH19Q9H159 772 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 CPQQ9Y646 472 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 MYO7AQ13402 2215 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms