RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 NBASA2RRP1 2371 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 CXorf51AA0A1B0GTR3 108 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 D6RAR5 112 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 GOLGA8SH3BPF8 625 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 TM7SF2O76062 418 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 GFPT2O94808 682 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 WT1P19544 449 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 ADRA1BP35368 520 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 HK3P52790 923 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 INHBCP55103 352 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 SRSF1Q07955 248 aaKnown RBP eCLIP16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 IRF4Q15306 451 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 ALG11Q2TAA5 492 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 WSCD2Q2TBF2 565 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 GDPD4Q6W3E5 623 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 USP53Q70EK8 1073 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 JAMLQ86YT9 394 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 HID1Q8IV36 788 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 FSTL5Q8N475 847 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 WRAP53Q9BUR4 548 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 TMEM51Q9NW97 253 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 OR12D3Q9UGF7 316 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 COQ6Q9Y2Z9 468 aa16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 LUC7L2Q9Y383 392 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 HEMK1Q9Y5R4 338 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-215ENST00000597649 AGRPO00253 132 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 RPLP0P05388 317 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 FAM87AP0C7U9 286 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 CYP11B1P15538 503 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 JAM2P57087 298 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 SNRPD1P62314 119 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 ATP11AP98196 1134 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 POLD3Q15054 466 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 RWDD4Q6NW29 188 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 LVRNQ6Q4G3 990 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 SFTPA2Q8IWL1 248 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 EMC1Q8N766 993 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 CXorf40AQ8TE69 158 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 ARHGEF26Q96DR7 871 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 OSBPL1AQ9BXW6 950 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 CPEB1Q9BZB8 566 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 KLC2Q9H0B6 622 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 LRRN3Q9H3W5 708 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 MYO6Q9UM54 1294 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 CAPN11Q9UMQ6 739 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 GPR34Q9UPC5 381 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 DOLKQ9UPQ8 538 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 DOPEY2Q9Y3R5 2298 aa16.62■□□□□ 0.25
SHKBP1-215ENST00000597649 TEX15Q9BXT5 2789 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 CHD5Q8TDI0 1954 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 A0A1W2PQJ5 194 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 TMX2-CTNND1H3BSU7 103 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 TOR1BO14657 336 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 NVLO15381 856 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 INSIG1O15503 277 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 SUV39H1O43463 412 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 FERP16591 822 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 RHOQP17081 205 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 ITIH1P19827 911 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 CCKBRP32239 447 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 ETV5P41161 510 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 PEX5P50542 639 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 ZBED6P86452 979 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 NRG1Q02297 640 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 ZFP36L1Q07352 338 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 EIF3IQ13347 325 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 ELOCQ15369 112 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 TSR1Q2NL82 804 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 C15orf59Q2T9L4 293 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 TMEM52BQ4KMG9 183 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 ENPP7Q6UWV6 458 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 XKR5Q6UX68 686 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 RD3Q7Z3Z2 195 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 TMPRSS9Q7Z410 1059 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 VASH2Q86V25 355 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 SCG3Q8WXD2 468 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 CPA5Q8WXQ8 436 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 STRADBQ9C0K7 418 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 MAGEH1Q9H213 219 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 NOL6Q9H6R4 1146 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 TMEM248Q9NWD8 314 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 PISDQ9UG56 409 aa16.61■□□□□ 0.25
SHKBP1-215ENST00000597649 LRRC53A6NM62 1247 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 KDELR3O43731 214 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 TMCC1O94876 653 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 LRIG2O94898 1065 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 ITGB2P05107 769 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 ALPIP09923 528 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 CASP14P31944 242 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 ETFBP38117 255 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 MAPKAPK2P49137 400 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 BLKP51451 505 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 CYP4F2P78329 520 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 INPP5AQ14642 412 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 GSE1Q14687 1217 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 LRRC14Q15048 493 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 ASIC2Q16515 512 aa16.6■□□□□ 0.25
SHKBP1-215ENST00000597649 TBR1Q16650 682 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms