RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SSC4DQ8WTU2 575 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ART4Q93070 314 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 TUBGCP2Q9BSJ2 902 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 CEP44Q9C0F1 390 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 B3GNT4Q9C0J1 378 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 CDH19Q9H159 772 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 NDST4Q9H3R1 872 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 SAMSN1Q9NSI8 373 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 AKAP7Q9P0M2 348 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ITPR3Q14573 2671 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 SETD2Q9BYW2 2564 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 C2CD3Q4AC94 2353 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 IGHV5-10-1A0A0J9YXX1 117 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 DRGXA6NNA5 263 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 B4DGG1 531 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 RAD1O60671 282 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 MBD3O95983 291 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 KRT5P13647 590 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 TFE3P19532 575 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 MPSTP25325 297 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 PON1P27169 355 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 WSCD2Q2TBF2 565 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 C14orf28Q4W4Y0 310 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 ARTNQ5T4W7 220 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 CAPRIN2Q6IMN6 1127 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 RETSATQ6NUM9 610 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 LEKR1Q6ZMV7 388 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 TAF8Q7Z7C8 310 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 TEX19Q8NA77 164 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 GPBAR1Q8TDU6 330 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 APOBEC4Q8WW27 367 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 PDXPQ96GD0 296 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 SLC45A3Q96JT2 553 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 FAM81BQ96LP2 452 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 RBM15Q96T37 977 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 TKTL2Q9H0I9 626 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 ATP13A1Q9HD20 1204 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 SIX2Q9NPC8 291 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 PIGVQ9NUD9 493 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 AJAP1Q9UKB5 411 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 PCDHGA3Q9Y5H0 932 aa13.88□□□□□ -0.19
SHKBP1-208ENST00000595726 LOC101059948A0A1B0GTJ6 334 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 BECN2A8MW95 431 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 VPS4BO75351 444 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CPNE6O95741 557 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 TNFP01375 233 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 PNLIPP16233 465 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 PEX5P50542 639 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 SLC20A2Q08357 652 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CDC20Q12834 499 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 INPP5AQ14642 412 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 NFATC4Q14934 902 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 LRRC14Q15048 493 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 TCP11X2Q5H9J9 407 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 OTUD1Q5VV17 481 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 C11orf57Q6ZUT1 292 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 WDTC1Q8N5D0 677 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CCL4L1Q8NHW4 92 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 ENOX1Q8TC92 643 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CXorf40AQ8TE69 158 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 OR1E3Q8WZA6 343 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 SHC3Q92529 594 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 FUBP1Q96AE4 644 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CCDC74BQ96LY2 380 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 APOOQ9BUR5 198 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 DPEP2Q9H4A9 486 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 MRPL40Q9NQ50 206 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 KLQ9UEF7 1012 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 CELSR1Q9NYQ6 3014 aa13.87□□□□□ -0.19
SHKBP1-208ENST00000595726 TOR1BO14657 336 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 PRKCGP05129 697 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 EEF1GP26641 437 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 GNA15P30679 374 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 ACVRL1P37023 503 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 MAZP56270 477 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 PDCLQ13371 301 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 MEA1Q16626 185 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 MYLK3Q32MK0 819 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 ATXN7L2Q5T6C5 722 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 CDKAL1Q5VV42 579 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 SPECC1LQ69YQ0 1117 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 DPY19L2P1Q6NXN4 242 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 C16orf46Q6P387 395 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 NETO2Q8NC67 525 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 ZNF606Q8WXB4 792 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 CPXM1Q96SM3 734 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 C1QTNF7Q9BXJ2 289 aa13.86□□□□□ -0.19
SHKBP1-208ENST00000595726 TMEM168Q9H0V1 697 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms